RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 C11orf24Q96F05 449 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MRPL57Q9BQC6 102 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MED18Q9BUE0 208 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 SPATC1LQ9H0A9 340 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 C11orf54Q9H0W9 315 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 RPF1Q9H9Y2 349 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 POLG2Q9UHN1 485 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF639Q9UID6 485 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 YARS2Q9Y2Z4 477 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 HSPE1-MOB4S4R3N1 261 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 SPEF2Q9C093 1822 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 SDHDO14521 159 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 RP2O75695 350 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 HMGCRP04035 888 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 CLUP10909 449 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 GLUD2P49448 558 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 NUDT6P53370 316 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 LIMK2P53671 638 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 HTRA4P83105 476 aaPredicted RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 IRF9Q00978 393 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 PRKG2Q13237 762 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 RAPSNQ13702 412 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 AGMOQ6ZNB7 445 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 MON1BQ7L1V2 547 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ZC3H3Q8IXZ2 948 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 OR52N1Q8NH53 320 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 THAP6Q8TBB0 222 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 RAET1EQ8TD07 263 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 GPR151Q8TDV0 419 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 YIPF5Q969M3 257 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 TCEAL4Q96EI5 215 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 COL21A1Q96P44 957 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ACO2Q99798 780 aaKnown RBP7.45□□□□□ -1.22
VTI1A-201ENST00000393077 FICDQ9BVA6 458 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ASB4Q9Y574 426 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 ITGB4P16144 1822 aa7.45□□□□□ -1.22
VTI1A-201ENST00000393077 POM121BA6NF01 834 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LYRM1O43325 122 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PSMD10O75832 226 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PAPSS2O95340 614 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CD2P06729 351 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ACSM4P0C7M7 580 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 HSD17B1P14061 328 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TCF3P15923 654 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 GPD1P21695 349 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 YWHAQP27348 245 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SPDYE7PQ495Y7 208 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 RTP2Q5QGT7 225 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 NOL9Q5SY16 702 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 HYIQ5T013 277 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SYT6Q5T7P8 510 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LETMD1Q6P1Q0 360 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ZFP82Q8N141 532 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PLD6Q8N2A8 252 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 FSTL5Q8N475 847 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LRRC46Q96FV0 321 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 WDR77Q9BQA1 342 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SYT11Q9BT88 431 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TTPALQ9BTX7 342 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 FBXL12Q9NXK8 326 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 MIOXQ9UGB7 285 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 NDRG3Q9UGV2 375 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TBX20Q9UMR3 447 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LIPT1Q9Y234 373 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 RPH3AQ9Y2J0 694 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 POLR3HQ9Y535 204 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TUBGCP6Q96RT7 1819 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 NUP188Q5SRE5 1749 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TEX13CA0A0J9YWL9 993 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 M0QYV0 167 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LRCH4O75427 683 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CDRT1O95170 752 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 HRGP04196 525 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 THEGLP0DJG4 465 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 UNGP13051 313 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ARSBP15848 533 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CHMP24386 653 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 GTF2A2P52657 109 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 FCGRTP55899 365 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TAF1CQ15572 869 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 AVPI1Q5T686 147 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 BCL2L15Q5TBC7 163 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 KANK2Q63ZY3 851 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TXNRD3NBQ6F5E7 133 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SLC41A1Q8IVJ1 513 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SLC13A3Q8WWT9 602 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 BTN2A3PQ96KV6 586 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PPP3R2Q96LZ3 170 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SLC30A3Q99726 388 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LRRC3Q9BY71 257 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 IL22Q9GZX6 179 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 GALNT9Q9HCQ5 603 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 THUMPD1Q9NXG2 353 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PTTG3PQ9NZH4 202 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ATXN7L1Q9ULK2 861 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 POFUT2Q9Y2G5 429 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms