RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 DUSP12Q9UNI6 340 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 POM121BA6NF01 834 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 LATO43561 262 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 BCKDHAP12694 445 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 XRCC1P18887 633 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 RPL10P27635 214 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 DGKEP52429 567 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 AP2B1P63010 937 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 NFATC4Q14934 902 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 CYP2A13Q16696 494 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 LCTLQ6UWM7 567 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 Q6ZS52 159 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 TMPRSS11BQ86T26 416 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SYNPOQ8N3V7 929 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 DPP10Q8N608 796 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC5A11Q8WWX8 675 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 REPS1Q96D71 796 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ASB9Q96DX5 294 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 ZBTB18Q99592 522 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 MENTQ9BUN1 341 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 EFCAB11Q9BUY7 163 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 FGF22Q9HCT0 170 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 CD300AQ9UGN4 299 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 EBF1Q9UH73 591 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 WDR37Q9Y2I8 494 aa11.07□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRSS38A1L453 326 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 ZNF839A8K0R7 811 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CHURC1-FNTBB4DL54 471 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 C1GALT1C1LP0DN25 315 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 AMD1P17707 334 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CTBSQ01459 385 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 NFYCQ13952 458 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SPATS1Q496A3 300 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PAGE2BQ5JRK9 111 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PAGE3Q5JUK9 113 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRAMEF14Q5SWL7 426 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRAMEF13Q5VWM6 474 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PTCRAQ6ISU1 281 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 MED27Q6P2C8 311 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SYT13Q7L8C5 426 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 OR7G3Q8NG95 312 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 ITFG2Q969R8 447 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 APIPQ96GX9 242 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 IL17FQ96PD4 163 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC39A3Q9BRY0 314 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 HAUS8Q9BT25 410 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 DPY30Q9C005 99 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 OSGEPL1Q9H4B0 414 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CLMPQ9H6B4 373 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 S100A14Q9HCY8 104 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 STOML1Q9UBI4 398 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 VPS29Q9UBQ0 182 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PLAGL1Q9UM63 463 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SH2B3Q9UQQ2 575 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 TDRKHQ9Y2W6 561 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 GPSM3Q9Y4H4 160 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 ACOT8O14734 319 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 BCAS2O75934 225 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 APBB3O95704 486 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SEMA4FO95754 770 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 IDSP22304 550 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 GCKP35557 465 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC7A2P52569 658 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CLDN8P56748 225 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CLDN2P57739 230 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRKCQQ04759 706 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 LAPTM5Q13571 262 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 TSTA3Q13630 321 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 FLOT2Q14254 428 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CATSPEREQ5SY80 951 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 NXPE4Q6UWF7 544 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 LAS2Q8IYD9 372 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 BMFQ96LC9 184 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 C12orf66Q96MD2 445 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 OR2M4Q96R27 311 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 CDX2Q99626 313 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 MOSPD1Q9UJG1 213 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 DLGAP4Q9Y2H0 992 aa11.06□□□□□ -0.64
SMARCAL1-203ENST00000392128 MAP3K7O43318 606 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 IL6P05231 212 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 SLC6A2P23975 617 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 CALRP27797 417 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 MS4A2Q01362 244 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 TRAP1Q12931 704 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 UAP1L1Q3KQV9 507 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 RNF175Q8N4F7 328 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 FLCNQ8NFG4 579 aa11.05□□□□□ -0.64
SMARCAL1-203ENST00000392128 HUS1BQ8NHY5 278 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms