RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SBSNQ6UWP8 590 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 TMEM126BQ8IUX1 230 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 GOLGA6L1Q8N7Z2 621 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 EPS8L3Q8TE67 593 aaKnown RBP18.66■□□□□ 0.58
GTF3A-201ENST00000381140 ZNF501Q96CX3 271 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-201ENST00000381140 IRAK4Q9NWZ3 460 aa18.66■□□□□ 0.58
GTF3A-201ENST00000381140 USP24Q9UPU5 2620 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 TEX51A0A1B0GUA7 166 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 KIAA0754O94854 1291 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 WISP3O95389 354 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-201ENST00000381140 LIPCP11150 499 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 ITPKBP27987 946 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 CRABP2P29373 138 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 TBPL1P62380 186 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 CLN3Q13286 438 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 NAE1Q13564 534 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 COL9A2Q14055 689 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-201ENST00000381140 PWWP2BQ6NUJ5 590 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 TAOK1Q7L7X3 1001 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 TBC1D1Q86TI0 1168 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-201ENST00000381140 SPACA3Q8IXA5 215 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 OR1L3Q8NH93 324 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 PGM2Q96G03 612 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 EGFL8Q99944 293 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 DPH7Q9BTV6 452 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 DHRS4Q9BTZ2 278 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 DERL2Q9GZP9 239 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 MRPS30Q9NP92 439 aaKnown RBP18.65■□□□□ 0.58
GTF3A-201ENST00000381140 CCDC177Q9NQR7 707 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-201ENST00000381140 SNX15Q9NRS6 342 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 EURLQ9NYK6 297 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 ACSL6Q9UKU0 697 aa18.65■□□□□ 0.58
GTF3A-201ENST00000381140 ASPMQ8IZT6 3477 aa18.64■□□□□ 0.58
GTF3A-201ENST00000381140 HMX2A2RU54 273 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 HCRTR1O43613 425 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 RAD1O60671 282 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 CDH16O75309 829 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 ENO2P09104 434 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-201ENST00000381140 SLC35E2BP0CK96 405 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 GCAP28676 217 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 SERPINB8P50452 374 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 AP1S2P56377 157 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.64■□□□□ 0.57
GTF3A-201ENST00000381140 PRAMEF17Q5VTA0 474 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 ICE2Q659A1 982 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 FCRL6Q6DN72 434 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 ADAMTSL2Q86TH1 951 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 VASH2Q86V25 355 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 LRRC56Q8IYG6 542 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-201ENST00000381140 GALNT6Q8NCL4 622 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 EXT2Q93063 718 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 SLC6A20Q9NP91 592 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 LGALS13Q9UHV8 139 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 SERTAD3Q9UJW9 196 aa18.64■□□□□ 0.57
GTF3A-201ENST00000381140 NOVA2Q9UNW9 492 aaKnown RBP18.64■□□□□ 0.57
GTF3A-201ENST00000381140 WDFY3Q8IZQ1 3526 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 NCF1BA6NI72 391 aaPredicted RBP18.63■□□□□ 0.57
GTF3A-201ENST00000381140 NCF1CA8MVU1 366 aaPredicted RBP18.63■□□□□ 0.57
GTF3A-201ENST00000381140 H3BQF6 201 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 NRP2O60462 931 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 SCRG1O75711 98 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 CCNDBP1O95273 360 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 FKBP9O95302 570 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 NTRK1P04629 796 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 NCF1P14598 390 aaPredicted RBP18.63■□□□□ 0.57
GTF3A-201ENST00000381140 CD1DP15813 335 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 TYK2P29597 1187 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 SERPINB9P50453 376 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 ATP1A2P50993 1020 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 ITGA1P56199 1179 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 IRF9Q00978 393 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 PPP1R3AQ16821 1122 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 TAF1BQ53T94 588 aaPredicted RBP18.63■□□□□ 0.57
GTF3A-201ENST00000381140 AGBL2Q5U5Z8 902 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 PRAMEF13Q5VWM6 474 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 C19orf48Q6RUI8 117 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 ADCK2Q7Z695 626 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 BPHLQ86WA6 291 aaPredicted RBP18.63■□□□□ 0.57
GTF3A-201ENST00000381140 CACNA2D3Q8IZS8 1091 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 DNAJC22Q8N4W6 341 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 IL22RA1Q8N6P7 574 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 DCAKDQ8WVC6 231 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 PYCR2Q96C36 320 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 DPH1Q9BZG8 443 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 SLC7A5P2Q9GIP4 190 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 VPS11Q9H270 941 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 TLK1Q9UKI8 766 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 PILRAQ9UKJ1 303 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 ACOT9Q9Y305 439 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 OARD1Q9Y530 152 aa18.63■□□□□ 0.57
GTF3A-201ENST00000381140 KRT38O76015 456 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 CTSBP07858 339 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 ATP6V0D1P61421 351 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 SRSF6Q13247 344 aaKnown RBP18.62■□□□□ 0.57
GTF3A-201ENST00000381140 OR4D1Q15615 310 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 TNFAIP8L3Q5GJ75 292 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 BROXQ5VW32 411 aa18.62■□□□□ 0.57
GTF3A-201ENST00000381140 TIPARPQ7Z3E1 657 aaKnown RBP18.62■□□□□ 0.57
GTF3A-201ENST00000381140 MCATQ8IVS2 390 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms