RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 FAM98BQ52LJ0 330 aaKnown RBP22.4■■□□□ 1.18
VPS16-201ENST00000380443 ADAMTSL4Q6UY14 1074 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 GPR180Q86V85 440 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 CHERPQ8IWX8 916 aaKnown RBP22.4■■□□□ 1.18
VPS16-201ENST00000380443 CFAP206Q8IYR0 622 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 DTWD1Q8N5C7 304 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 HM13Q8TCT9 377 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 APIPQ96GX9 242 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 CNBD2Q96M20 576 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 PAIP1Q9H074 479 aaKnown RBP22.4■■□□□ 1.18
VPS16-201ENST00000380443 OR2AG1Q9H205 316 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 COQ6Q9Y2Z9 468 aa22.4■■□□□ 1.18
VPS16-201ENST00000380443 ZFC3H1O60293 1989 aaKnown RBP22.4■■□□□ 1.18
VPS16-201ENST00000380443 PRRC2BQ5JSZ5 2229 aaKnown RBP22.39■■□□□ 1.18
VPS16-201ENST00000380443 ELOVL7A1L3X0 281 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 POU3F3P20264 500 aaPredicted RBP22.39■■□□□ 1.17
VPS16-201ENST00000380443 MTAPQ13126 283 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 RPA4Q13156 261 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 ADRM1Q16186 407 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 VITQ6UXI7 678 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 TMEM184AQ6ZMB5 413 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 TRAPPC5Q8IUR0 188 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 YAF2Q8IY57 180 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 OR2L2Q8NH16 312 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 WDR34Q96EX3 536 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 MED8Q96G25 268 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 APOLD1Q96LR9 279 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 TRANK1O15050 2925 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 C2orf16Q68DN1 1984 aa22.39■■□□□ 1.17
VPS16-201ENST00000380443 FAM220BPB1ANY3 271 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 RASAL1O95294 804 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 SLC16A8O95907 504 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 RAP2AP10114 183 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 GRIA2P42262 883 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 ASMTP46597 345 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 BDKRB1P46663 353 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 METAP1P53582 386 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 TANGO2Q6ICL3 276 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 UNC5DQ6UXZ4 953 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 CARM1Q86X55 608 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 MSRB3Q8IXL7 192 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 ZNF548Q8NEK5 533 aaPredicted RBP22.38■■□□□ 1.17
VPS16-201ENST00000380443 HIC2Q96JB3 615 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 ANKRD60Q9BZ19 345 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 EHD1Q9H4M9 534 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 PRSS16Q9NQE7 514 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 GULP1Q9UBP9 304 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 FAM8A1Q9UBU6 413 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 INVSQ9Y283 1065 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 FADS3Q9Y5Q0 445 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 DNMT3AQ9Y6K1 912 aaPredicted RBP22.38■■□□□ 1.17
VPS16-201ENST00000380443 MGAT4DA6NG13 374 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 E7EQ34 232 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 CKMT2P17540 419 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 IL1RNP18510 177 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 CD22P20273 847 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 PDHA2P29803 388 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 GJA4P35212 333 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 NHSL2Q5HYW2 709 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 CALHM3Q86XJ0 350 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 OR9A1PQ8NGU1 263 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 MRPL38Q96DV4 380 aaKnown RBP22.38■■□□□ 1.17
VPS16-201ENST00000380443 TSSK3Q96PN8 268 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 OR4K3Q96R72 315 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 CHID1Q9BWS9 393 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 MRPS26Q9BYN8 205 aaKnown RBP22.38■■□□□ 1.17
VPS16-201ENST00000380443 EPB41L1Q9H4G0 881 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 SERHLQ9NQF3 203 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 SLC25A37Q9NYZ2 338 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 ATXN10Q9UBB4 475 aa22.38■■□□□ 1.17
VPS16-201ENST00000380443 KLHL33A6NCF5 533 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 SOCS2O14508 198 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 PBLDP30039 288 aaPredicted RBP22.37■■□□□ 1.17
VPS16-201ENST00000380443 IL12RB1P42701 662 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 KIR3DL1P43629 444 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 CHRNB3Q05901 458 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 ACSM2AQ08AH3 577 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 ACSM2BQ68CK6 577 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 SYT12Q8IV01 421 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 MMAAQ8IVH4 418 aaKnown RBP22.37■■□□□ 1.17
VPS16-201ENST00000380443 MICU2Q8IYU8 434 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 CLHC1Q8NHS4 586 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 SETD7Q8WTS6 366 aaKnown RBP22.37■■□□□ 1.17
VPS16-201ENST00000380443 COX14Q96I36 57 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 CPPED1Q9BRF8 314 aaPredicted RBP22.37■■□□□ 1.17
VPS16-201ENST00000380443 EFCAB11Q9BUY7 163 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 SGPP1Q9BX95 441 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 KAT8Q9H7Z6 458 aaKnown RBP22.37■■□□□ 1.17
VPS16-201ENST00000380443 SGK2Q9HBY8 427 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 ZNF639Q9UID6 485 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 DYRK1BQ9Y463 629 aa22.37■■□□□ 1.17
VPS16-201ENST00000380443 RNF103-CHMP3A0A140T963 221 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 DEAF1O75398 565 aaPredicted RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 POP7O75817 140 aaKnown RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 KAT7O95251 611 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 EPHX1P07099 455 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 RETP07949 1114 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 HOXB9P17482 250 aaPredicted RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 P2RY2P41231 377 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 ABHD18Q0P651 414 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms