RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 HK3P52790 923 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 HERVK_113P63132 956 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 IRF9Q00978 393 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 FGFBP1Q14512 234 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 TSC22D1Q15714 1073 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 PRSS36Q5K4E3 855 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 C17orf99Q6UX52 265 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 CEP68Q76N32 757 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RRM2BQ7LG56 351 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RBFAQ8N0V3 343 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 EDARADDQ8WWZ3 215 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ROPN1LQ96C74 230 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ELP4Q96EB1 424 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM68Q96MH6 324 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RBP7Q96R05 134 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 DPCDQ9BVM2 203 aaPredicted RBP7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SDHAF2Q9NX18 166 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 MALT1Q9UDY8 824 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RNF6Q9Y252 685 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 A0A087WZ62 844 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 LOC100130705A0A1B0GUX0 176 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 MTMR11A4FU01 709 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 EFCAB7A8K855 629 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 FXYD1O00168 92 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ENDOD1O94919 500 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 HTR3BO95264 441 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 CBX7O95931 251 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SMPD1P17405 629 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 JUNDP17535 347 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 PSMA3P25788 255 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ACSL1P33121 698 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ADRA1BP35368 520 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 TIE1P35590 1138 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 FOXK2Q01167 660 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 DUSP4Q13115 394 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 CAPRIN1Q14444 709 aaKnown RBP7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SLC6A19Q695T7 634 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 C12orf40Q86WS4 652 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RIMKLAQ8IXN7 391 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ABI1Q8IZP0 508 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 HS3ST5Q8IZT8 346 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 STPG2Q8N412 459 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SPPL2BQ8TCT7 592 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 ITCHQ96J02 903 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 RNF145Q96MT1 663 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 KCNS3Q9BQ31 491 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 FDXACB1Q9BRP7 624 aaPredicted RBP7.29□□□□□ -1.24
CDKL5-201ENST00000379989 BABAM2Q9NXR7 383 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 UBQLN2Q9UHD9 624 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 SIX4Q9UIU6 781 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 INVSQ9Y283 1065 aa7.29□□□□□ -1.24
CDKL5-201ENST00000379989 MCM3APO60318 1980 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MFSD2BA6NFX1 497 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 E9PAM4 449 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MDM4O15151 490 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 GPR32O75388 356 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MPC2O95563 127 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ACAA1P09110 424 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 RYKP34925 604 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CTSKP43235 329 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CLCN3P51790 818 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 NAGLUP54802 743 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 RAB14P61106 215 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MVKQ03426 396 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PUDPQ08623 228 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 LARS2Q15031 903 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 QPRTQ15274 297 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MICAQ29983 383 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 COL28A1Q2UY09 1125 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PAN2Q504Q3 1202 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MARCH8Q5T0T0 291 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PYHIN1Q6K0P9 492 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 NPNTQ6UXI9 565 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 USP45Q70EL2 814 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZZZ3Q8IYH5 903 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 UBE2J2Q8N2K1 259 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CLHC1Q8NHS4 586 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 NELL1Q92832 810 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 VAT1Q99536 393 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 COPS4Q9BT78 406 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PI4K2AQ9BTU6 479 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ITPAQ9BY32 194 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 IL22Q9GZX6 179 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ERVK-19Q9WJR5 959 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PCDHB5Q9Y5E4 795 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MGAMO43451 1857 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 A0A1W2PPL8 197 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 DBX1A6NMT0 343 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 APOC4-APOC2K7ER74 178 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 M0R082 166 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 FABP7O15540 132 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CST3P01034 146 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms