RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 PSMA8Q8TAA3 256 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 VANGL1Q8TAA9 524 aaPredicted RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PNPT1Q8TCS8 783 aaKnown RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 TUBGCP3Q96CW5 907 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 OR5M11Q96RB7 305 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 ABCB10Q9NRK6 738 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 KLHL3Q9UH77 587 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 RTTNQ86VV8 2226 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 C2CD4DB7Z1M9 353 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PGRP06401 933 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SPANXN4Q5MJ08 99 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 BRAT1Q6PJG6 821 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SPESP1Q6UW49 350 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SPRED2Q7Z698 418 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 ANKRD13BQ86YJ7 626 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 GATAD2AQ86YP4 633 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 CYP4Z2PQ8N1L4 340 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 GTF2H4Q92759 462 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 WDR89Q96FK6 387 aaPredicted RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 ST6GAL2Q96JF0 529 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 FCRL2Q96LA5 508 aaPredicted RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PSD2Q9BQI7 771 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 TTYH2Q9BSA4 534 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 ZFP14Q9HCL3 533 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SMPD4Q9NXE4 827 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 YARS2Q9Y2Z4 477 aaKnown RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PRSS21Q9Y6M0 314 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 A0A087WXM4 84 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SHISA3A0PJX4 238 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PER2O15055 1255 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 TPD52L2O43399 206 aaKnown RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 NPHS1O60500 1241 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 SH3BGRLO75368 114 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 RHOP08100 348 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 CD79BP40259 229 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 TPI1P60174 286 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 NADSYN1Q6IA69 706 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 MON1AQ86VX9 555 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 OR4M2Q8NGB6 313 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 PHOX2BQ99453 314 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 MRPL57Q9BQC6 102 aaKnown RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 GLOD4Q9HC38 313 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 OLA1Q9NTK5 396 aaKnown RBP7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 RBM22Q9NW64 420 aaKnown RBP eCLIP7.15□□□□□ -1.262e-7■■■■■ 38.7
GPCPD1-201ENST00000379019 PCTPQ9UKL6 214 aa7.15□□□□□ -1.26
GPCPD1-201ENST00000379019 VPS13CQ709C8 3753 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 TRBV5-3A0A0A0MS03 114 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 A8MX80 341 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 FAM47E-STBD1D6RA91 191 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 J3KTA2 159 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 hCG_2039718K7EN88 272 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 GAPDHSO14556 408 aaPredicted RBP7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 PAMP19021 973 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 ZNF852Q6ZMS4 543 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 MEX3DQ86XN8 651 aaKnown RBP7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 YAF2Q8IY57 180 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 METTL4Q8N3J2 472 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 DHRSXQ8N5I4 330 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 OR6Q1Q8NGQ2 317 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 MIPOL1Q8TD10 442 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 L3HYPDHQ96EM0 354 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 BFARQ9NZS9 450 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 FBXO4Q9UKT5 387 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 LHX6Q9UPM6 363 aa7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 GPC6Q9Y625 555 aaPredicted RBP7.15□□□□□ -1.27
GPCPD1-201ENST00000379019 CACNA1CQ13936 2221 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 A0A087X1B8 175 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TRAV19A0A0A6YYK7 116 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 A0A1W2PP18 115 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TNFRSF10BO14763 440 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 NPC1O15118 1278 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 MTSS1O43312 755 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 ABCB7O75027 752 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 GABARAPO95166 117 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 GPIP06744 558 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 DNAJB13P59910 316 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 CYP4F2P78329 520 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 CYP4F3Q08477 520 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TWF1Q12792 350 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 SQLEQ14534 574 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 AGAP7PQ5VUJ5 663 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 AFMIDQ63HM1 303 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 ASTLQ6HA08 431 aaPredicted RBP7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 ABRAXAS1Q6UWZ7 409 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 PLEKHG7Q6ZR37 379 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 LINC00523Q86TU6 105 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 NLGN4YQ8NFZ3 816 aaPredicted RBP7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 NT5MQ9NPB1 228 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TXNDC16Q9P2K2 825 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 PTHP01270 115 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 JUNBP17275 347 aaPredicted RBP7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TFF2Q03403 129 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 CDH17Q12864 832 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 TRAP1Q12931 704 aaKnown RBP7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 PARP15Q460N3 678 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 HEATR4Q86WZ0 1026 aa7.14□□□□□ -1.27
GPCPD1-201ENST00000379019 PJA1Q8NG27 643 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms