RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 NACC2Q96BF6 587 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 IL17FQ96PD4 163 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 SMAD5Q99717 465 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC30A3Q99726 388 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 AARSD1Q9BTE6 412 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CCDC68Q9H2F9 335 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 SAYSD1Q9NPB0 183 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 PPANQ9NQ55 473 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC22A11Q9NSA0 550 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 INTS7Q9NVH2 962 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 DHCR7Q9UBM7 475 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 TSR3Q9UJK0 312 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 RUVBL2Q9Y230 463 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 HECTD1Q9ULT8 2610 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 NBASA2RRP1 2371 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CTAGE15A4D2H0 777 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 EIF3HO15372 352 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 SORBS2O94875 1100 aaKnown RBP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 CTAGE8P0CG41 777 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 ITGAXP20702 1163 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 CCNFP41002 786 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 ARSFP54793 590 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 SOX8P57073 446 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 SRSF1Q07955 248 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 ATP1A4Q13733 1029 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 ACSBG2Q5FVE4 666 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 TEDDM1Q5T9Z0 273 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 YOD1Q5VVQ6 348 aaPredicted RBP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 TTC23LQ6PF05 361 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 FIGLAQ6QHK4 219 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 KIAA0408Q6ZU52 694 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 MRGPREQ86SM8 312 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 CTAGE6Q86UF2 777 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 CTAGE4Q8IX94 777 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 MNS1Q8NEH6 495 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 GABPB2Q8TAK5 448 aaPredicted RBP18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 GSDMBQ8TAX9 411 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 DENND1AQ8TEH3 1009 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 KCNJ9Q92806 393 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 NDC1Q9BTX1 674 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 NUDT9Q9BW91 350 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 KLHL20Q9Y2M5 609 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 NFS1Q9Y697 457 aa18.14■□□□□ 0.49
TMEM88B-201ENST00000378821 PTPN13Q12923 2485 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 FITM1A5D6W6 292 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 ERGP11308 486 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 BDKRB1P46663 353 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 MLLT10P55197 1068 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 CAV1Q03135 178 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 SF1Q15637 639 aaKnown RBP18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 CYP2A13Q16696 494 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 CCSMST1Q4G0I0 132 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 ZC3H12BQ5HYM0 836 aaKnown RBP18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 C1orf189Q5VU69 101 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 MLIPQ5VWP3 458 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 CAPN12Q6ZSI9 719 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 SKA2Q8WVK7 121 aaPredicted RBP18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 DLG3Q92796 817 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 FKBP10Q96AY3 582 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 PTERQ96BW5 349 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 NDNQ99608 321 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 GPR21Q99679 349 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 TXLNGQ9NUQ3 528 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 IFT80Q9P2H3 777 aaPredicted RBP18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 CIDEBQ9UHD4 219 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 SLC39A10Q9ULF5 831 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 COMMD10Q9Y6G5 202 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 NUP210LQ5VU65 1888 aa18.13■□□□□ 0.49
TMEM88B-201ENST00000378821 HEATR5BQ9P2D3 2071 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 A0A1W2PPV9 198 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 IGHEP01854 428 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 AHSGP02765 367 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 ALBP02768 609 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 UMODP07911 640 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 GRIA3P42263 894 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 GUCY2DQ02846 1103 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 MGAT5Q09328 741 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 CUL1Q13616 776 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 NADK2Q4G0N4 442 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 TCTE1Q5JU00 501 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 RBM20Q5T481 1227 aaKnown RBP18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 GALNT7Q86SF2 657 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 C2orf73Q8N5S3 287 aaPredicted RBP18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 OR2A1Q8NGT9 310 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 CD200R1Q8TD46 325 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 MAGEC3Q8TD91 643 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 PYROXD1Q8WU10 500 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 PHACTR1Q9C0D0 580 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 SLC26A1Q9H2B4 701 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 WDR54Q9H977 334 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 MOCS1Q9NZB8 636 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 SPATA7Q9P0W8 599 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 C5AR2Q9P296 337 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 KLHL42Q9P2K6 505 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 NDOR1Q9UHB4 597 aa18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 GPN3Q9UHW5 284 aaPredicted RBP18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 PTRH2Q9Y3E5 179 aaKnown RBP18.12■□□□□ 0.49
TMEM88B-201ENST00000378821 A0A1B0GX78 115 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms