RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 VANGL1Q8TAA9 524 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 CDCA3Q99618 268 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 MCOLN1Q9GZU1 580 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 GSTO2Q9H4Y5 243 aa14.11□□□□□ -0.15
TCOF1-202ENST00000377797 ZNF282Q9UDV7 671 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-202ENST00000377797 SLC16A5O15375 505 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 NTSR1P30989 418 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 RPL5P46777 297 aaKnown RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ATP4BP51164 291 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 MTTPP55157 894 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 GALNT1Q10472 559 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 WFDC5Q8TCV5 224 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 DTNBP1Q96EV8 351 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 FNDC11Q9BVV2 318 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 EPS8L2Q9H6S3 715 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 COL11A1P12107 1806 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 AP3D1O14617 1153 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 VEGFDO43915 354 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SERPINA1P01009 418 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 RPS3P23396 243 aaKnown RBP eCLIP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 RPS9P46781 194 aaKnown RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 C1DQ13901 141 aaKnown RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 DGCR6Q14129 220 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SLC9A5Q14940 896 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 PDCD4Q53EL6 469 aaKnown RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 MACC1Q6ZN28 852 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 HSD11B1LQ7Z5J1 315 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 OR4E2Q8NGC2 313 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 PIH1D2Q8WWB5 315 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SLC9A6Q92581 669 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 FATE1Q969F0 183 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ZBED6CLQ96FA7 236 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 CMTM7Q96FZ5 175 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SLC38A3Q99624 504 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 EURLQ9NYK6 297 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ATP6V1HQ9UI12 483 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 TP73O15350 636 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 CSNK1DP48730 415 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 PCYT1AP49585 367 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ABRAXAS2Q15018 415 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 HIPK1Q86Z02 1210 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 NRSN1Q8IZ57 195 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 TTLQ8NG68 377 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 MZB1Q8WU39 189 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 LRCH3Q96II8 777 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SMPD3Q9NY59 655 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 IKZF3Q9UKT9 509 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 PDPK1O15530 556 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ERI3O43414 337 aaKnown RBP14.1□□□□□ -0.15
TCOF1-202ENST00000377797 STATHP02808 62 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 CDH1P12830 882 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 SUOXP51687 545 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 CDC42P60953 191 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 STX4Q12846 297 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 TMEM245Q9H330 911 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 POLR1BQ9H9Y6 1135 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 ACSL5Q9ULC5 683 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 HS3ST2Q9Y278 367 aa14.1□□□□□ -0.15
TCOF1-202ENST00000377797 WASH3PC4AMC7 463 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 hCG_2039718K7EN88 272 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 NR1H2P55055 460 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 SIM2Q14190 667 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TNFAIP8L2Q6P589 184 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 GATAD2AQ86YP4 633 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 BTBD9Q96Q07 612 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 NDEL1Q9GZM8 345 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 FAM192AQ9GZU8 254 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 KCNK13Q9HB14 408 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PDP1Q9P0J1 537 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PDE10AQ9Y233 779 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 FABP3P05413 133 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 NT5EP21589 574 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 HTR6P50406 440 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 ERVPABLB-1P60509 514 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 FOXM1Q08050 763 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TYSND1Q2T9J0 566 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 USP39Q53GS9 565 aaKnown RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 GALNT5Q7Z7M9 940 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 WBP2Q969T9 261 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 REXO4Q9GZR2 422 aaKnown RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 CLK4Q9HAZ1 481 aaKnown RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 C8orf4Q9NR00 106 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TBC1D23Q9NUY8 699 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 ENGP17813 658 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 COPZ1P61923 177 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 RHDQ02161 417 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TEAD4Q15561 434 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 TMCO5AQ8N6Q1 288 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 RGMAQ96B86 450 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PKMYT1Q99640 499 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 C20orf27Q9GZN8 174 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 ZCCHC3Q9NUD5 404 aaKnown RBP14.09□□□□□ -0.15
TCOF1-202ENST00000377797 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 PIAS3Q9Y6X2 628 aa14.09□□□□□ -0.15
TCOF1-202ENST00000377797 H7BY64 318 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms