RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 C8GP07360 202 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 PIM1P11309 404 aaPredicted RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 FOLR3P41439 243 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 GCGRP47871 477 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ETF1P62495 437 aaKnown RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 NFKB2Q00653 900 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 PDIA2Q13087 525 aaKnown RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 CALCOCO2Q13137 446 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 NKAIN1Q4KMZ8 207 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 RBM20Q5T481 1227 aaKnown RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 TEDDM1Q5T9Z0 273 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 CYHR1Q6ZMK1 362 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ATG14Q6ZNE5 492 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 TTLL10Q6ZVT0 673 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 MYO1HQ8N1T3 1032 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 SPATA4Q8NEY3 305 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ZNF480Q8WV37 535 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ZNF285Q96NJ3 590 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ZFYVE21Q9BQ24 234 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 WDR83Q9BRX9 315 aaKnown RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 DPH7Q9BTV6 452 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ZNF71Q9NQZ8 489 aaPredicted RBP16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ACSS2Q9NR19 701 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 CUTCQ9NTM9 273 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 ZFATQ9P243 1243 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 TAC3Q9UHF0 121 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 SNX24Q9Y343 169 aa16.12■□□□□ 0.17
HMGN4-201ENST00000377575 A0A0J9YVX5 310 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 OR2A25A4D2G3 310 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FITM1A5D6W6 292 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PABPN1LA6NDY0 278 aaKnown RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 ARGFXA6NJG6 315 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 E7ESA3 106 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 DSCR3O14972 297 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 ALAS2P22557 587 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 GABRB3P28472 473 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 CDKN2DP55273 166 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 VSX2P58304 361 aaPredicted RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PDAP1Q13442 181 aaKnown RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 THEMIS2Q5TEJ8 643 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FAM69BQ5VUD6 431 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 ICE2Q659A1 982 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 CPZQ66K79 652 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FAM45BPQ6NSW5 357 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 TCTN3Q6NUS6 607 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 TRMT10BQ6PF06 316 aaKnown RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 ANKMY2Q8IV38 441 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 GPATCH11Q8N954 259 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PPFIBP2Q8ND30 876 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FBXO36Q8NEA4 188 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FAM45AQ8TCE6 357 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 FKBP10Q96AY3 582 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 IP6K3Q96PC2 410 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PLCD4Q9BRC7 762 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 ING2Q9H160 280 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PLAC1Q9HBJ0 212 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 SLC6A20Q9NP91 592 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 WHRNQ9P202 907 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 SLC17A6Q9P2U8 582 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 TLK1Q9UKI8 766 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 TP53TG5Q9Y2B4 290 aa16.11■□□□□ 0.17
HMGN4-201ENST00000377575 PTRH2Q9Y3E5 179 aaKnown RBP16.11■□□□□ 0.17
HMGN4-201ENST00000377575 E7ENX8 843 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 TP73O15350 636 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 SLC16A5O15375 505 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 SUV39H1O43463 412 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 KLF7O75840 302 aaPredicted RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 IMPA1P29218 277 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 RRADP55042 308 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 ABATP80404 500 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 TIAL1Q01085 375 aaKnown RBP eCLIP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 TAP2Q03519 686 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 PRDX1Q06830 199 aaKnown RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 SSPNQ14714 243 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 SLC9A5Q14940 896 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 HECTD2Q5U5R9 776 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 PTRH1Q86Y79 214 aaKnown RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 ZBED8Q8IZ13 594 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 TMEM102Q8N9M5 508 aaPredicted RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 OR2Y1Q8NGV0 311 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 EEF1AKMT1Q8WVE0 214 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 LINGO1Q96FE5 620 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 CCDC138Q96M89 665 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 ERP44Q9BS26 406 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 TRIM55Q9BYV6 548 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 PARVBQ9HBI1 364 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 CCDC177Q9NQR7 707 aaPredicted RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 NSMCE4AQ9NXX6 385 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 ANAPC2Q9UJX6 822 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 G3BP2Q9UN86 482 aaKnown RBP16.1■□□□□ 0.17
HMGN4-201ENST00000377575 MED13Q9UHV7 2174 aa16.1■□□□□ 0.17
HMGN4-201ENST00000377575 RAD51CO43502 376 aa16.09■□□□□ 0.17
HMGN4-201ENST00000377575 NRP2O60462 931 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms