RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 IGSF6O95976 241 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 SPAM1P38567 509 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 EEFSECP57772 596 aaKnown RBP16.69■□□□□ 0.26
TRIM27-201ENST00000377194 CD47Q08722 323 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 SELPLGQ14242 412 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 HIST2H2ACQ16777 129 aaPredicted RBP16.69■□□□□ 0.26
TRIM27-201ENST00000377194 RSBN1Q5VWQ0 802 aaPredicted RBP16.69■□□□□ 0.26
TRIM27-201ENST00000377194 LRRC66Q68CR7 880 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 MACC1Q6ZN28 852 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 SLC22A15Q8IZD6 547 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 CPXM2Q8N436 756 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 PPM1MQ96MI6 270 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 TMEM39AQ9NV64 488 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
TRIM27-201ENST00000377194 LAG3P18627 525 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LHCGRP22888 699 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 SERPINA4P29622 427 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 RACK1P63244 317 aaKnown RBP16.68■□□□□ 0.26
TRIM27-201ENST00000377194 PTSQ03393 145 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LAPTM5Q13571 262 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 PTGR1Q14914 329 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 DGUOKQ16854 277 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 MPP7Q5T2T1 576 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LAIR2Q6ISS4 152 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 CCDC81Q6ZN84 652 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 ITCHQ96J02 903 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LMLNQ96KR4 655 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 NODALQ96S42 347 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 CD244Q9BZW8 370 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 AMBRA1Q9C0C7 1298 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LATS2Q9NRM7 1088 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 AGAP14A8MT82 685 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 LEFTY2O00292 366 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 HOXC11O43248 304 aaPredicted RBP16.68■□□□□ 0.26
TRIM27-201ENST00000377194 HTR1EP28566 365 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 CASP3P42574 277 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 B4GALNT1Q00973 533 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 HMGCS1Q01581 520 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 CRY1Q16526 586 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 ATP13A5Q4VNC0 1218 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 SPATC1Q76KD6 591 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 PROSER1Q86XN7 944 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 RPL3LQ92901 407 aaKnown RBP16.68■□□□□ 0.26
TRIM27-201ENST00000377194 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
TRIM27-201ENST00000377194 DENND4CQ5VZ89 1909 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 ZNF99A8MXY4 864 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 TAF4O00268 1085 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 IDH3BO43837 385 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 SLC2A4P14672 509 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 CSF2RAP15509 400 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MTHFRP42898 656 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MAPK8P45983 427 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MTPNP58546 118 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 ZXDCQ2QGD7 858 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 ASTLQ6HA08 431 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 HID1Q8IV36 788 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 LYSMD2Q8IV50 215 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 DPP10Q8N608 796 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 FAM83FQ8NEG4 500 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MYLIPQ8WY64 445 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 SCRN2Q96FV2 425 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MBOAT4Q96T53 435 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 BTBD2Q9BX70 525 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 WWOXQ9NZC7 414 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 DKK3Q9UBP4 350 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 CDH23Q9H251 3354 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 MYO7AQ13402 2215 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 LOC730098B7Z3J9 87 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 PCMT1P22061 227 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 CCR2P41597 374 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 RPL38P63173 70 aaKnown RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 VAC14Q08AM6 782 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 GPR33Q49SQ1 333 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 CCDC58Q4VC31 144 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 SGO1Q5FBB7 561 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 TTC23Q5W5X9 447 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 DESI1Q6ICB0 168 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 CBARPQ8N350 705 aaPredicted RBP16.67■□□□□ 0.26
TRIM27-201ENST00000377194 OR7G1Q8NGA0 311 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 LYSMD1Q96S90 227 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 FBXO8Q9NRD0 319 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 OPTCQ9UBM4 332 aa16.67■□□□□ 0.26
TRIM27-201ENST00000377194 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 MFN2O95140 757 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 GTF2E2P29084 291 aaKnown RBP16.66■□□□□ 0.26
TRIM27-201ENST00000377194 WDR5P61964 334 aaKnown RBP16.66■□□□□ 0.26
TRIM27-201ENST00000377194 EMX1Q04741 257 aaPredicted RBP16.66■□□□□ 0.26
TRIM27-201ENST00000377194 KIAA0040Q15053 153 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 ZDHHC13Q8IUH4 622 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 CCDC103Q8IW40 242 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 DTWD1Q8N5C7 304 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 TP53INP1Q96A56 240 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 AURKBQ96GD4 344 aaPredicted RBP16.66■□□□□ 0.26
TRIM27-201ENST00000377194 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
TRIM27-201ENST00000377194 HCFC1R1Q9NWW0 138 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms