RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RFTN2Q52LD8 501 aaPredicted RBP10.75□□□□□ -0.69
PDPN-202ENST00000376057 USP39Q53GS9 565 aaKnown RBP10.75□□□□□ -0.69
PDPN-202ENST00000376057 PRAMEF14Q5SWL7 426 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 PRAMEF13Q5VWM6 474 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 REP15Q6BDI9 236 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 HIST2H2AA3Q6FI13 130 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 MED27Q6P2C8 311 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 FAM129CQ86XR2 697 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 RCN3Q96D15 328 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 MED8Q96G25 268 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 SARGQ9BW04 601 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 FBXL21Q9UKT6 434 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.75□□□□□ -0.69
PDPN-202ENST00000376057 GPSM3Q9Y4H4 160 aa10.75□□□□□ -0.69
PDPN-202ENST00000376057 A0A1W2PPV9 198 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 METTL12A8MUP2 240 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 PRICKLE3O43900 615 aaPredicted RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 RAB28P51157 221 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 POLR2JP52435 117 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 ABATP80404 500 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SLC25A3Q00325 362 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 PRKG2Q13237 762 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ART3Q13508 389 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CLCA4Q14CN2 919 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CPSF6Q16630 551 aaKnown RBP eCLIP10.74□□□□□ -0.69
PDPN-202ENST00000376057 IMPG1Q17R60 797 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 GALNT18Q6P9A2 607 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CYP20A1Q6UW02 462 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ENPP7Q6UWV6 458 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 GK5Q6ZS86 529 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 Q6ZSR6 202 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 C10orf67Q8IYJ2 551 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 BIRC7Q96CA5 298 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CARS2Q9HA77 564 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 FARSBQ9NSD9 589 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 CCDC167Q9P0B6 97 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 FAM8A1Q9UBU6 413 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CYP8B1Q9UNU6 501 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SZT2Q5T011 3432 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SPTBN5Q9NRC6 3674 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 ANKRD12Q6UB98 2062 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CCDC163A0A0D9SF12 145 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SPTY2D1-AS1A0A0U1RR47 76 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ATP6V1G2O95670 118 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 TNFP01375 233 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 AMD1P17707 334 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CD27P26842 260 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ARL1P40616 181 aaPredicted RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 NUDT2P50583 147 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ARFIP1P53367 373 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CLDN8P56748 225 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 CLDN2P57739 230 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 UBXN2BQ14CS0 331 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 TLR1Q15399 786 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ALG11Q2TAA5 492 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 IL23RQ5VWK5 629 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 SLC36A4Q6YBV0 504 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 PGBD3Q8N328 593 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ENDOVQ8N8Q3 282 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 DCBLD1Q8N8Z6 715 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 OR7G3Q8NG95 312 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 TESCQ96BS2 214 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 C12orf66Q96MD2 445 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 ACTL8Q9H568 366 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 WDR41Q9HAD4 459 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 GID8Q9NWU2 228 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
PDPN-202ENST00000376057 VPS29Q9UBQ0 182 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 PCDHGA7Q9Y5G6 932 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 DOCK9Q9BZ29 2069 aa10.74□□□□□ -0.69
PDPN-202ENST00000376057 FFAR3O14843 346 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 GPR42O15529 346 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 FKBP9O95302 570 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 IL6P05231 212 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 SLC2A4P14672 509 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 THOP1P52888 689 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 CLNS1AP54105 237 aaKnown RBP10.73□□□□□ -0.69
PDPN-202ENST00000376057 KCNK10P57789 538 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 ACTR3P61158 418 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 PHEXP78562 749 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 TFF2Q03403 129 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 TBL3Q12788 808 aaKnown RBP10.73□□□□□ -0.69
PDPN-202ENST00000376057 SPIN4Q56A73 249 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 PIGGQ5H8A4 983 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 SIX5Q8N196 739 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 KRT78Q8N1N4 520 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 MFSD2AQ8NA29 543 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 CHTF18Q8WVB6 975 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 STARD8Q92502 1023 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 FERD3LQ96RJ6 166 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 THTPAQ9BU02 230 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 DENND2DQ9H6A0 471 aaPredicted RBP10.73□□□□□ -0.69
PDPN-202ENST00000376057 CLMPQ9H6B4 373 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 TBC1D17Q9HA65 648 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 ABCD2Q9UBJ2 740 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 GIMAP2Q9UG22 337 aa10.73□□□□□ -0.69
PDPN-202ENST00000376057 LEF1Q9UJU2 399 aaPredicted RBP10.73□□□□□ -0.69
PDPN-202ENST00000376057 G3BP2Q9UN86 482 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms