RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TOP1MTQ969P6 601 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 CHCHD6Q9BRQ6 235 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 AMBNQ9NP70 447 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 CITO14578 2027 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 SNPHO15079 494 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 LEFTY1O75610 366 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 OPN1SWP03999 348 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 IL12AP29459 219 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 TMEM115Q12893 351 aaPredicted RBP13.28□□□□□ -0.28
C9orf47-203ENST00000375851 ARMC3Q5W041 872 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 KCTD8Q6ZWB6 473 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 GPR151Q8TDV0 419 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 TUBGCP5Q96RT8 1024 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 OR51B5Q9H339 312 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 SPHK2Q9NRA0 654 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 KCNK6Q9Y257 313 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 TMEM98Q9Y2Y6 226 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 NAV1Q8NEY1 1877 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 MYH7P12883 1935 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 HCN1O60741 890 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
C9orf47-203ENST00000375851 ARSDP51689 593 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 C6orf136Q5SQH8 315 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 STEAP4Q687X5 459 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 SATL1Q86VE3 508 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 CEP97Q8IW35 865 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 ZNF354BQ96LW1 612 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 POLR2J3Q9H1A7 115 aaKnown RBP13.28□□□□□ -0.28
C9orf47-203ENST00000375851 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
C9orf47-203ENST00000375851 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 MKS1Q9NXB0 559 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 IKZF2Q9UKS7 526 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 CHD4Q14839 1912 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 IGFALSP35858 605 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 DSC3Q14574 896 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 PM20D1Q6GTS8 502 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 OXR1Q8N573 874 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 RTP4Q96DX8 246 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 PKP2Q99959 881 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 ELOVL2Q9NXB9 296 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 GPN3Q9UHW5 284 aaPredicted RBP13.28□□□□□ -0.28
C9orf47-203ENST00000375851 SLCO3A1Q9UIG8 710 aa13.28□□□□□ -0.28
C9orf47-203ENST00000375851 PRORSD1PA6NEY8 169 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 RIIAD1A6NNX1 92 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 M0QZQ0 153 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 CD1DP15813 335 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 CLCN4P51793 760 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 PSMD4P55036 377 aaKnown RBP13.27□□□□□ -0.28
C9orf47-203ENST00000375851 TARDBPQ13148 414 aaKnown RBP eCLIP13.27□□□□□ -0.28
C9orf47-203ENST00000375851 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 OAFQ86UD1 273 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 TTC9BQ8N6N2 239 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 MOCOSQ96EN8 888 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 YIPF4Q9BSR8 244 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 COPS4Q9BT78 406 aa13.27□□□□□ -0.28
C9orf47-203ENST00000375851 A0A0J9YVX5 310 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 SDHDO14521 159 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 GMPRP36959 345 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 DSTNP60981 165 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 GANABQ14697 944 aaKnown RBP13.27□□□□□ -0.29
C9orf47-203ENST00000375851 RHEBL1Q8TAI7 183 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 NSUN5Q96P11 429 aaKnown RBP13.27□□□□□ -0.29
C9orf47-203ENST00000375851 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 TVP23BQ9NYZ1 205 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 COQ6Q9Y2Z9 468 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
C9orf47-203ENST00000375851 MYH15Q9Y2K3 1946 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 CCDC182A6NF36 153 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 BCAS2O75934 225 aaPredicted RBP13.27□□□□□ -0.29
C9orf47-203ENST00000375851 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 FAM91A1Q658Y4 838 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 KCT2Q8NC54 265 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 ZNF382Q96SR6 550 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 TPT1P8Q9HAU6 139 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 NEK6Q9HC98 313 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 M0QX08 132 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 AIREO43918 545 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 GMFGO60234 142 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 KRT33AO76009 404 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 GBAP04062 536 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 SRPRAP08240 638 aaKnown RBP13.27□□□□□ -0.29
C9orf47-203ENST00000375851 HOXB2P14652 356 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 DGKEP52429 567 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 ABHD18Q0P651 414 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 QPRTQ15274 297 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 SUSD1Q6UWL2 747 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 NATD1Q8N6N6 113 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 TSTD1Q8NFU3 115 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 OR10G2Q8NGC3 310 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 TMBIM1Q969X1 311 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 EXO5Q9H790 373 aa13.27□□□□□ -0.29
C9orf47-203ENST00000375851 MYH3P11055 1940 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms