RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SIMC1Q8NDZ2 872 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 OR8J3Q8NGG0 315 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 TOX2Q96NM4 488 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 HBEGFQ99075 208 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 TTYH2Q9BSA4 534 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 ITPAQ9BY32 194 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 OLA1Q9NTK5 396 aaKnown RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 EHD3Q9NZN3 535 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 DNMT3LQ9UJW3 386 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 RNF112Q9ULX5 631 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 YIPF1Q9Y548 306 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 KIAA1671Q9BY89 1806 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 ECI2O75521 394 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 ABLIM3O94929 683 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 SEMA3DO95025 777 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 APOA1P02647 267 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 GRK5P34947 590 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 SERINC3Q13530 473 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 PTPRRQ15256 657 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 WDR45BQ5MNZ6 344 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 MYOCQ99972 504 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 RASSF1Q9NS23 344 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■□□□ 11.5
MSH5-204ENST00000375755 WBP11Q9Y2W2 641 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 GMPPBQ9Y5P6 360 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 M0R082 166 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 ERVH48-1M5A8F1 160 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 KERAO60938 352 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 CORO1AP31146 461 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 S100A5P33763 92 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 RGRP47804 291 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 DAPP51397 102 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 DEFA1P59665 94 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 DEFA3P59666 94 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 MAD2L1BPQ15013 274 aaPredicted RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 TSNQ15631 228 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 RBBP7Q16576 425 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 BCL7AQ4VC05 210 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 Q5BKY6 102 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 TIGD7Q6NT04 549 aaPredicted RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 CEP68Q76N32 757 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 TBATAQ96M53 351 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 SIGLEC11Q96RL6 698 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.4
MSH5-204ENST00000375755 NUAK2Q9H093 628 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 IRF2BPLQ9H1B7 796 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 ARNT2Q9HBZ2 717 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 TM9SF3Q9HD45 589 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
MSH5-204ENST00000375755 LTBP2Q14767 1821 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ELOVL7A1L3X0 281 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ACSL4O60488 711 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 STC2O76061 302 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 OR4F21O95013 312 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 HTR7P34969 479 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 GALNT3Q14435 633 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CARD16Q5EG05 197 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CYP20A1Q6UW02 462 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 SLC38A6Q8IZM9 456 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 AMER2Q8N7J2 671 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CDYL2Q8N8U2 506 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ARRDC2Q8TBH0 407 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 NCLNQ969V3 563 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CLPBQ9H078 707 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 UXTQ9UBK9 157 aaPredicted RBP12.57□□□□□ -0.4
MSH5-204ENST00000375755 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.57□□□□□ -0.4
MSH5-204ENST00000375755 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
MSH5-204ENST00000375755 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CHD5Q8TDI0 1954 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 F5H5T6 163 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 H3BNC9 293 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CDC7O00311 574 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ANKRD28O15084 1053 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 GJA1P17302 382 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 FMO4P31512 558 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 SUOXP51687 545 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 KEAP1Q14145 624 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CCDC71Q8IV32 467 aaPredicted RBP12.57□□□□□ -0.4
MSH5-204ENST00000375755 KIAA1191Q96A73 305 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms