RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 PRSS23O95084 383 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 GABARAPO95166 117 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 HPRP00739 348 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 FHP07954 510 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 CDKN2CP42773 168 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 VLDLRP98155 873 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 KRR1Q13601 381 aaKnown RBP13.39□□□□□ -0.27
MCF2L-204ENST00000375608 ACOX1Q15067 660 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 TBRG1Q3YBR2 411 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 FAM180BQ6P0A1 224 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 LYSMD2Q8IV50 215 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 NELL1Q92832 810 aa13.39□□□□□ -0.27
MCF2L-204ENST00000375608 H3BM21 787 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ATP6V1E1P36543 226 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 FCGRTP55899 365 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 TAF1AQ15573 450 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ZNF675Q8TD23 568 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 SH3KBP1Q96B97 665 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 PHF21AQ96BD5 680 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 FEVQ99581 238 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 IRF2BPLQ9H1B7 796 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 DYRK4Q9NR20 520 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 NUAK1O60285 661 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 AP2A2O94973 939 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 F2P00734 622 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 FPR1P21462 350 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CHI3L1P36222 383 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CLK3P49761 638 aaKnown RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 GABARAPL2P60520 117 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 DSC3Q14574 896 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 PYDC2Q56P42 97 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 USP43Q70EL4 1123 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 STK40Q8N2I9 435 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 PARP16Q8N5Y8 322 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 RDH12Q96NR8 316 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MMP28Q9H239 520 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MMP27Q9H306 513 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MANBAO00462 879 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 SSX4O60224 188 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 KIAA0513O60268 411 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 TPST2O60704 377 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 SOX14O95416 240 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ESR1P03372 595 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 TYMPP19971 482 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 IL12RB1P42701 662 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ABRQ12979 859 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 COL9A2Q14055 689 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 BCL7AQ4VC05 210 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CPZQ66K79 652 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 UBE2R2Q712K3 238 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 ZNF280BQ86YH2 543 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 OR5AK3PQ8NH89 298 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 FKBP10Q96AY3 582 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MYEOVQ96EZ4 313 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CENPOQ9BU64 300 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CTPS2Q9NRF8 586 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 NLE1Q9NVX2 485 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-204ENST00000375608 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 SLC22A14Q9Y267 594 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 QSER1Q2KHR3 1735 aa13.38□□□□□ -0.27
MCF2L-204ENST00000375608 CCDC182A6NF36 153 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TRIM64CA6NLI5 447 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 ERN1O75460 977 aaKnown RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TRBC1P01850 177 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TUFMP49411 452 aaKnown RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 SNRPD2P62316 118 aaKnown RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 NKX3-2P78367 333 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 IL18R1Q13478 541 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 POM121L1PQ3SYA9 428 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TMPRSS11AQ6ZMR5 421 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TLR9Q9NR96 1032 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 PCDHGB6Q9Y5F9 930 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 PRAMEF11O60813 436 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 PDYNP01213 254 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 NUDT7P0C024 238 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 TGM1P22735 817 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 KDELR2P33947 212 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 PTGER3P43115 390 aa13.37□□□□□ -0.27
MCF2L-204ENST00000375608 YBEYP58557 167 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-204ENST00000375608 ARPC4P59998 168 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms