RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TCF25Q9BQ70 676 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 MRGBPQ9NV56 204 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 RLIMQ9NVW2 624 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 SIRT5Q9NXA8 310 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 SCML2Q9UQR0 700 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 CKAP5Q14008 2032 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TULP3O75386 442 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 KRT6AP02538 564 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 KRT6BP04259 564 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 GSTM2P28161 218 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 KRT6CP48668 564 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 PRIM2P49643 509 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ISL1P61371 349 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 EFL1Q7Z2Z2 1120 aaKnown RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 SLC39A13Q96H72 371 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF382Q96SR6 550 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TMEM161AQ9NX61 479 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 USE1Q9NZ43 259 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 C5AR2Q9P296 337 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ENPP5Q9UJA9 477 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 H3BN98 237 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 WWP2O00308 870 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 AP3D1O14617 1153 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 NME6O75414 186 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 EPN2O95208 641 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ALDH2P05091 517 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 CLK3P49761 638 aaKnown RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 RNF144AP50876 292 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 BCL2L1Q07817 233 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 CTF1Q16619 201 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF362Q5T0B9 420 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 OR2T5Q6IEZ7 315 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 VRK3Q8IV63 474 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TCAIMQ8N3R3 496 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ZBTB2Q8N680 514 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 DBF4BQ8NFT6 615 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 OR2T29Q8NH02 315 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 MYO19Q96H55 970 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 PYURFQ96I23 114 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF641Q96N77 438 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 PPP1R2P1Q96PQ5 205 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 FAM124BQ9H5Z6 455 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-202ENST00000375597 RRAGCQ9HB90 399 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 SLC52A3Q9NQ40 469 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 TIGARQ9NQ88 270 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 CLEC4EQ9ULY5 219 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
MCF2L-202ENST00000375597 PIKFYVEQ9Y2I7 2098 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
MCF2L-202ENST00000375597 CTDSP2O14595 271 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 ASNA1O43681 348 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 KRT8P05787 483 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 LAMP1P11279 417 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF135P52742 658 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-202ENST00000375597 NAE1Q13564 534 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 PCBP2Q15366 365 aaKnown RBP eCLIP11.46□□□□□ -0.573e-8■■■■■ 33.9
MCF2L-202ENST00000375597 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 XKR7Q5GH72 579 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 DESI1Q6ICB0 168 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 CYP2U1Q7Z449 544 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 RTN4RL1Q86UN2 441 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-202ENST00000375597 TRIM48Q8IWZ4 208 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 RIMKLAQ8IXN7 391 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.57
MCF2L-202ENST00000375597 DNASE1L2Q92874 299 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 PKP4Q99569 1192 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 NRTNQ99748 197 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 CNPPD1Q9BV87 410 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 CEP44Q9C0F1 390 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 NUAK2Q9H093 628 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.57
MCF2L-202ENST00000375597 GLYATL1P3A0A0U1RQE8 302 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 LRRTM2O43300 516 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 SULT1C4O75897 302 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 CCNKO75909 580 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 FABP3P05413 133 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 ARF5P84085 180 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 ACSM2AQ08AH3 577 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 GALNT1Q10472 559 aaPredicted RBP11.46□□□□□ -0.58
MCF2L-202ENST00000375597 ACSM2BQ68CK6 577 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 AKAP14Q86UN6 197 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 GPR65Q8IYL9 337 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 CAMKK1Q8N5S9 505 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 PSKH2Q96QS6 385 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 TTYH2Q9BSA4 534 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 IL26Q9NPH9 171 aa11.46□□□□□ -0.58
MCF2L-202ENST00000375597 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms