RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 C1orf74Q96LT6 269 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TSSK3Q96PN8 268 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OR10H1Q9Y4A9 318 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PCDHGA2Q9Y5H1 932 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CREBL2O60519 120 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TLR5O60602 858 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SLC35G6P0C7Q6 338 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PITRM1Q5JRX3 1037 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FRG2Q64ET8 278 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OR4K2Q8NGD2 314 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CXorf40AQ8TE69 158 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FRG2BQ96QU4 278 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PLEKHA1Q9HB21 404 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TIAM2Q8IVF5 1701 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 A0A1W2PPW3 197 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SCAMP3O14828 347 aaKnown RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SLC16A5O15375 505 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 E2F1Q01094 437 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 RELAQ04206 551 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SCARB2Q14108 478 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TBRG1Q3YBR2 411 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 C2CD4AQ8NCU7 369 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF675Q8TD23 568 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TSEN15Q8WW01 171 aaKnown RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FATE1Q969F0 183 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OSGEPL1Q9H4B0 414 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TMEM184CQ9NVA4 438 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF30P17039 623 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PTBP1P26599 531 aaKnown RBP eCLIP9.95□□□□□ -0.823e-8■■■■□ 20.8
PTCH1-204ENST00000375290 CMTR2Q8IYT2 770 aaKnown RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 CMTM7Q96FZ5 175 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TSGA13Q96PP4 275 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 TJP1Q07157 1748 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 FAM25EA8MYX2 175 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OR7A10O76100 309 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 IL32P24001 234 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 MAP2K3P46734 347 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 SLC14A2Q15849 920 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 OR56A1Q8NGH5 318 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-204ENST00000375290 PCDHB9Q9Y5E1 797 aa9.95□□□□□ -0.82
PTCH1-204ENST00000375290 MYH13Q9UKX3 1938 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 IGKV6D-41A0A0C4DH26 115 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DISC1C4P0D8 188 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 PRNPP04156 253 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 COL6A1P12109 1028 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 TLR1Q15399 786 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF527Q8NB42 609 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DPF3Q92784 378 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 UCK2Q9BZX2 261 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 TOR3AQ9H497 397 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 AOC2O75106 756 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 NAPRTQ6XQN6 538 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 HDDC3Q8N4P3 179 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 RNF31Q96EP0 1072 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 BTF3L4Q96K17 158 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ZSCAN5AQ9BUG6 496 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CIPCQ9C0C6 399 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GBA2Q9HCG7 927 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 KRBOX1C9JBD0 128 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 PHYHO14832 338 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 OR10H2O60403 315 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CYB5AP00167 134 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CKMT2P17540 419 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 FAM69AQ5T7M9 428 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 DUS1LQ6P1R4 473 aaKnown RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 FAM198BQ6UWH4 519 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ASB18Q6ZVZ8 466 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CARM1Q86X55 608 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 RAD51AP1Q96B01 352 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GAD1Q99259 594 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 QPCTLQ9NXS2 382 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 FAAHO00519 579 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ARF4P18085 180 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 HOXD12P35452 270 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 UNC5DQ6UXZ4 953 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 MED30Q96HR3 178 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 SPIN1Q9Y657 262 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 TMEM14AQ9Y6G1 99 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CACNB4O00305 520 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 HRH2P25021 359 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CLCA4Q14CN2 919 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 C9orf64Q5T6V5 341 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CCBE1Q6UXH8 406 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 TMEM135Q86UB9 458 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ASB13Q8WXK3 278 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF285Q96NJ3 590 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 PHB2Q99623 299 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ACP6Q9NPH0 428 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 PIH1D1Q9NWS0 290 aaKnown RBP9.94□□□□□ -0.82
PTCH1-204ENST00000375290 SIX4Q9UIU6 781 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 CLDN4O14493 209 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 GABBR2O75899 941 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 RASGRP1O95267 797 aa9.94□□□□□ -0.82
PTCH1-204ENST00000375290 ADH1CP00326 375 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms