RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ZCCHC2Q9C0B9 1178 aaKnown RBP11.89□□□□□ -0.51
UBR4-203ENST00000375225 PAIP1Q9H074 479 aaKnown RBP11.89□□□□□ -0.51
UBR4-203ENST00000375225 KAT8Q9H7Z6 458 aaKnown RBP11.89□□□□□ -0.51
UBR4-203ENST00000375225 FARSBQ9NSD9 589 aaKnown RBP11.89□□□□□ -0.51
UBR4-203ENST00000375225 FAM120CQ9NX05 1096 aaKnown RBP11.89□□□□□ -0.51
UBR4-203ENST00000375225 CIDEBQ9UHD4 219 aa11.89□□□□□ -0.51
UBR4-203ENST00000375225 ZNHIT2Q9UHR6 403 aa11.89□□□□□ -0.51
UBR4-203ENST00000375225 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
UBR4-203ENST00000375225 PIKFYVEQ9Y2I7 2098 aa11.89□□□□□ -0.51
UBR4-203ENST00000375225 TRBV5-3A0A0A0MS03 114 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 TSPAN11A1L157 253 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 ATG13O75143 517 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 EPN2O95208 641 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 SNAP29O95721 258 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 ALPLP05186 524 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 AMD1P17707 334 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 LHCGRP22888 699 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 FSHRP23945 695 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 SOX11P35716 441 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 GABARAPL2P60520 117 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 B4GALNT1Q00973 533 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 DCTN2Q13561 401 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 DUOXA1Q1HG43 343 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 PGS1Q32NB8 556 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 LRRC23Q53EV4 343 aaPredicted RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 TMEM214Q6NUQ4 689 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 SUSD1Q6UWL2 747 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 CYP2U1Q7Z449 544 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 SYT12Q8IV01 421 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 KLHDC8AQ8IYD2 350 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 CELF5Q8N6W0 485 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 SETD9Q8NE22 299 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 FAM110BQ8TC76 370 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 GLMNQ92990 594 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 TBC1D20Q96BZ9 403 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 MTFMTQ96DP5 389 aaKnown RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 CCDC97Q96F63 343 aaPredicted RBP11.88□□□□□ -0.51
UBR4-203ENST00000375225 PYURFQ96I23 114 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 FBXL20Q96IG2 436 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 VPS35Q96QK1 796 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 BRF2Q9HAW0 419 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 PRM3Q9NNZ6 103 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 DKK3Q9UBP4 350 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 CLEC4EQ9ULY5 219 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 ERVW-1Q9UQF0 538 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 PCDHB14Q9Y5E9 798 aa11.88□□□□□ -0.51
UBR4-203ENST00000375225 PSMD11O00231 422 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 RFXAPO00287 272 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 SLCO2B1O94956 709 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 GNAO1P09471 354 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 TYRP14679 529 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 NELFEP18615 380 aaKnown RBP11.87□□□□□ -0.51
UBR4-203ENST00000375225 EEF1B2P24534 225 aaKnown RBP11.87□□□□□ -0.51
UBR4-203ENST00000375225 SLC5A2P31639 672 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 CA5AP35218 305 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 RPL3P39023 403 aaKnown RBP11.87□□□□□ -0.51
UBR4-203ENST00000375225 C21orf58P58505 322 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 ST8SIA6P61647 398 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 PLIN5Q00G26 463 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 VAC14Q08AM6 782 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 CHIT1Q13231 466 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 ZC3H12BQ5HYM0 836 aaKnown RBP11.87□□□□□ -0.51
UBR4-203ENST00000375225 ANXA8L1Q5VT79 327 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 GRHL2Q6ISB3 625 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 NOXRED1Q6NXP6 359 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 TMEM184AQ6ZMB5 413 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 MBOAT1Q6ZNC8 495 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 Q6ZVU0 165 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 DPPA4Q7L190 304 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 DET1Q7L5Y6 550 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 KRTCAP2Q8N6L1 136 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 VN1R2Q8NFZ6 395 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 FCRL1Q96LA6 429 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 NPLQ9BXD5 320 aaPredicted RBP11.87□□□□□ -0.51
UBR4-203ENST00000375225 CXorf21Q9HAI6 301 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 GPRC5BQ9NZH0 403 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 MARK1Q9P0L2 795 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 VPS29Q9UBQ0 182 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 IL36AQ9UHA7 158 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
UBR4-203ENST00000375225 UGT2B11O75310 529 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PRKD3O94806 890 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 JUNBP17275 347 aaPredicted RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 SDC1P18827 310 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 HPCAL1P37235 193 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 CDH15P55291 814 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 YBX1P67809 324 aaKnown RBP11.86□□□□□ -0.51
UBR4-203ENST00000375225 PCDH1Q08174 1060 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 ACSM2AQ08AH3 577 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 MTAPQ13126 283 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 PON2Q15165 354 aa11.86□□□□□ -0.51
UBR4-203ENST00000375225 SKIV2LQ15477 1246 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms