RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 LCP2Q13094 533 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 GTF2H2Q13888 395 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 FASTKQ14296 549 aaKnown RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 RBBP7Q16576 425 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 ZXDCQ2QGD7 858 aaPredicted RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 CES4AQ5XG92 561 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 ZCCHC8Q6NZY4 707 aaKnown RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 GTF2H2CQ6P1K8 395 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 TMEM26Q6ZUK4 368 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 RPS27LQ71UM5 84 aaKnown RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 THOC6Q86W42 341 aaKnown RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 AMIGO1Q86WK6 493 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 C17orf82Q86X59 251 aaPredicted RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 SNX31Q8N9S9 440 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 GPR156Q8NFN8 814 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 OR4C6Q8NH72 309 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 HMGCLL1Q8TB92 370 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 JPH3Q8WXH2 748 aaPredicted RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 SH3KBP1Q96B97 665 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 MOCOSQ96EN8 888 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 PITPNM3Q9BZ71 974 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 SEMA4BQ9NPR2 832 aaPredicted RBP16.93■□□□□ 0.3
PFDN6-201ENST00000374606 ABCF3Q9NUQ8 709 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 THAP1Q9NVV9 213 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 BTBD3Q9Y2F9 522 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 STK38LQ9Y2H1 464 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 KNTC1P50748 2209 aa16.93■□□□□ 0.3
PFDN6-201ENST00000374606 FAM149AA5PLN7 773 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 E7ENX8 843 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 ITM2AO43736 263 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 PCDHGA12O60330 932 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SNNO75324 88 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 KATNA1O75449 491 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 LYPLA1O75608 230 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SNUPNO95149 360 aaKnown RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 MLYCDO95822 493 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 VIMP08670 466 aaKnown RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 CCR10P46092 362 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 CDH13P55290 713 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 TAP2Q03519 686 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 ARL13AQ5H913 290 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 PRAMEF13Q5VWM6 474 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 FAM47EQ6ZV65 393 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SLC35F3Q8IY50 421 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 LRRC56Q8IYG6 542 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 LMNTD1Q8N9Z9 388 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 TRPC4APQ8TEL6 797 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 NRTNQ99748 197 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SGPP1Q9BX95 441 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SRMSQ9H3Y6 488 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 EML4Q9HC35 981 aaKnown RBP16.92■□□□□ 0.3
PFDN6-201ENST00000374606 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 SLC22A14Q9Y267 594 aa16.92■□□□□ 0.3
PFDN6-201ENST00000374606 PRB1P04280 392 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 CHRNGP07510 517 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 TSPAN8P19075 237 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 ARL1P40616 181 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-201ENST00000374606 GRK6P43250 576 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 OCRLQ01968 901 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 CDC16Q13042 620 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 INAVAQ3KP66 663 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 CCDC157Q569K6 752 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 SUSD1Q6UWL2 747 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 C2orf73Q8N5S3 287 aaPredicted RBP16.91■□□□□ 0.3
PFDN6-201ENST00000374606 LINC01555Q8NAE3 123 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 OR4E2Q8NGC2 313 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 MIPEPQ99797 713 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 IPPKQ9H8X2 491 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 UCK1Q9HA47 277 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 SLCO1B3Q9NPD5 702 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 DYRK1BQ9Y463 629 aa16.91■□□□□ 0.3
PFDN6-201ENST00000374606 LILRA5A6NI73 299 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 RHPN2P1A8MT19 583 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 TRIM38O00635 465 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 SHOX2O60902 331 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-201ENST00000374606 OTCP00480 354 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 ARRB2P32121 409 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-201ENST00000374606 PRKAA1Q13131 559 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 CUZD1Q86UP6 607 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 ZNF761Q86XN6 746 aaPredicted RBP16.9■□□□□ 0.3
PFDN6-201ENST00000374606 CRLF3Q8IUI8 442 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 LSMEM2Q8N112 164 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 SLC39A7Q92504 469 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 ATP6V1E2Q96A05 226 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 CHMP6Q96FZ7 201 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 OR4K3Q96R72 315 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 ZNF382Q96SR6 550 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 SORT1Q99523 831 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 SLC38A3Q99624 504 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 HAUS8Q9BT25 410 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 SHCBP1LQ9BZQ2 653 aa16.9■□□□□ 0.3
PFDN6-201ENST00000374606 C20orf27Q9GZN8 174 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms