RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 REXO4Q9GZR2 422 aaKnown RBP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 FBXO10Q9UK96 956 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 TRBV5-3A0A0A0MS03 114 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 RFXANKO14593 260 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SLC9A3R1O14745 358 aaPredicted RBP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SLC16A5O15375 505 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 NOBOXO60393 691 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 AP2A2O94973 939 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 CPSF4O95639 269 aaKnown RBP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SERPINA1P01009 418 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 HNRNPA1P09651 372 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 RAP2AP10114 183 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 PRLHRP49683 370 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 MEF2AQ02078 507 aaPredicted RBP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 STARD3Q14849 445 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 LDLRAP1Q5SW96 308 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 GPR180Q86V85 440 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 CHCHD4Q8N4Q1 142 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 PACRGLQ8N7B6 248 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 OTUB2Q96DC9 234 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SLC47A1Q96FL8 570 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SMURF2Q9HAU4 748 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 SGK2Q9HBY8 427 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 ASIC5Q9NY37 505 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 BTBD3Q9Y2F9 522 aa15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 PCYT1BQ9Y5K3 369 aaPredicted RBP15.49■□□□□ 0.07
CNKSR1-202ENST00000374253 PRUNE2Q8WUY3 3088 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 SLC5A10A0PJK1 596 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 HEPACAM2A8MVW5 462 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 SAP18O00422 153 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 YY2O15391 372 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 ADH1CP00326 375 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 PTPN6P29350 595 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 SMU1Q2TAY7 513 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 CATSPEREQ5SY80 951 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 PRR23BQ6ZRT6 265 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 TMPRSS11BQ86T26 416 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 MMAAQ8IVH4 418 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 SYTL1Q8IYJ3 562 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 MICU2Q8IYU8 434 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 DHRSXQ8N5I4 330 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 DGCR14Q96DF8 476 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 CPPED1Q9BRF8 314 aaPredicted RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 H3BM21 787 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 ZNF197O14709 1029 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 CST1P01037 141 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 CATP04040 527 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 PRPS2P11908 318 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 PRKACGP22612 351 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 HOXA9P31269 272 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 PON2Q15165 354 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 UGT8Q16880 541 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 C9orf64Q5T6V5 341 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 RNF165Q6ZSG1 346 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 NEIL2Q969S2 332 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 TIFAQ96CG3 184 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 DTD2Q96FN9 168 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 DPH2Q9BQC3 489 aaPredicted RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 LIN28AQ9H9Z2 209 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 CLK4Q9HAZ1 481 aaKnown RBP15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 VPS29Q9UBQ0 182 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 TMEM98Q9Y2Y6 226 aa15.48■□□□□ 0.07
CNKSR1-202ENST00000374253 DOCK9Q9BZ29 2069 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 GNGT2O14610 69 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 NPC1O15118 1278 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 B4GAT1O43505 415 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 LZTS3O60299 673 aaPredicted RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 CREG1O75629 220 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 C6P13671 934 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 COX7A2P14406 83 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 MYF6P23409 242 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 KIR3DL1P43629 444 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 GPR1P46091 355 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 NR1H2P55055 460 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 CASP9P55211 416 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 C16orf72Q14CZ0 275 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 LAPTM4AQ15012 233 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 ZNF621Q6ZSS3 439 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 GET4Q7L5D6 327 aaPredicted RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 TRMT11Q7Z4G4 463 aaKnown RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 TMEM132CQ8N3T6 1108 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 C1orf52Q8N6N3 182 aaKnown RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 WDR20Q8TBZ3 569 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 ITCHQ96J02 903 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 MPP4Q96JB8 637 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 PANX1Q96RD7 426 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 RBM38Q9H0Z9 239 aaKnown RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 KCNH6Q9H252 994 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 DDX18Q9NVP1 670 aaKnown RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 DKK3Q9UBP4 350 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 PLAGL1Q9UM63 463 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 VPS4AQ9UN37 437 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 DEAF1O75398 565 aaPredicted RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 SRPRAP08240 638 aaKnown RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 LAMP1P11279 417 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 WASP42768 502 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 HKDC1Q2TB90 917 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 LRRC23Q53EV4 343 aaPredicted RBP15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 LEMD2Q8NC56 503 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms