RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
HDAC8-205ENST00000373568 OARD1Q9Y530 152 aa12.65□□□□□ -0.38
HDAC8-205ENST00000373568 PCDHB3Q9Y5E6 796 aa12.65□□□□□ -0.38
HDAC8-205ENST00000373568 MDC1Q14676 2089 aaKnown RBP12.65□□□□□ -0.39
HDAC8-205ENST00000373568 TERTO14746 1132 aaKnown RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 SCRG1O75711 98 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 C2P06681 752 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 HIST1H2AGP0C0S8 130 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 HIST1H2ADP20671 130 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CRABP2P29373 138 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CMPK1P30085 196 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 RPA3P35244 121 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 RORAP35398 523 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 VSNL1P62760 191 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 OR4D1Q15615 310 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 UAP1Q16222 522 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 ZNF517Q6ZMY9 492 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 ADAMTSL2Q86TH1 951 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 VASH2Q86V25 355 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 PAQR7Q86WK9 346 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CACNA2D3Q8IZS8 1091 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 NLGN4XQ8N0W4 816 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 NLGN4YQ8NFZ3 816 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■■ 46.8
HDAC8-205ENST00000373568 HIST1H2AHQ96KK5 128 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 HIST1H2AJQ99878 128 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 H2AFJQ9BTM1 129 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 DPH7Q9BTV6 452 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 FANCEQ9HB96 536 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CCDC177Q9NQR7 707 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 SNX15Q9NRS6 342 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CUEDC1Q9NWM3 386 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 UTP6Q9NYH9 597 aaKnown RBP12.64□□□□□ -0.39
HDAC8-205ENST00000373568 EURLQ9NYK6 297 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 ANKMY1Q9P2S6 941 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 PLCL2Q9UPR0 1127 aa12.64□□□□□ -0.39
HDAC8-205ENST00000373568 LOC101059948A0A1B0GTJ6 334 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 POC1B-GALNT4F8VUJ3 575 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 CPNE3O75131 537 aaKnown RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 GUCA1CO95843 209 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 NTRK1P04629 796 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 INHBAP08476 426 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 SLC26A3P40879 764 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 STAT5AP42229 794 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 KCNC1P48547 511 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 ITGA1P56199 1179 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 ATP6V0D1P61421 351 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 ABATP80404 500 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 IRF9Q00978 393 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 GPS2Q13227 327 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 NAE1Q13564 534 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 CSHL1Q14406 222 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 SLC29A2Q14542 456 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 TGFBIQ15582 683 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 FBXO42Q6P3S6 717 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 LCTLQ6UWM7 567 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 ISCA2Q86U28 154 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 MCATQ8IVS2 390 aaKnown RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 KLHDC8AQ8IYD2 350 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 SNRNP27Q8WVK2 155 aaKnown RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 HNRNPLLQ8WVV9 542 aaKnown RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 KIAA1191Q96A73 305 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 PYCR2Q96C36 320 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 LRFN5Q96NI6 719 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 PLCD4Q9BRC7 762 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 TRIM54Q9BYV2 358 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 SPRTNQ9H040 489 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 MRPS30Q9NP92 439 aaKnown RBP12.63□□□□□ -0.39
HDAC8-205ENST00000373568 PCMTD2Q9NV79 361 aa12.63□□□□□ -0.39
HDAC8-205ENST00000373568 CACNA1BQ00975 2339 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 A0A096LPK6 155 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 EXOC1LA0A1B0GW35 172 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 E7EQ34 232 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 MAP3K7O43318 606 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 OR2B3O76000 313 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 LIFP15018 202 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 NPPBP16860 134 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 CCND1P24385 295 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 MSH2P43246 934 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 SLC6A12P48065 614 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 SERPINB8P50452 374 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 SERPINB9P50453 376 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 ATP1A2P50993 1020 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 RELAQ04206 551 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 NAA25Q14CX7 972 aa12.62□□□□□ -0.39
HDAC8-205ENST00000373568 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms