RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 HCRTR1O43613 425 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 RHOXF2BP0C7M4 288 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 TCN2P20062 427 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CCND1P24385 295 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 ECHS1P30084 290 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 ABATP80404 500 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MC1RQ01726 317 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 RHDQ02161 417 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PRDX1Q06830 199 aaKnown RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 GPS2Q13227 327 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 DNASE1L3Q13609 305 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 SLMAPQ14BN4 828 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PHKG1Q16816 387 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PRAMEF17Q5VTA0 474 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PRAMEF13Q5VWM6 474 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 FCRL6Q6DN72 434 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MBOAT1Q6ZNC8 495 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 ADAMTSL2Q86TH1 951 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MCATQ8IVS2 390 aaKnown RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CT55Q8WUE5 264 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 ATL1Q8WXF7 558 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 STARD8Q92502 1023 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MR1Q95460 341 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MED8Q96G25 268 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CYTH2Q99418 400 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 SELENOSQ9BQE4 189 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 RHOXF2Q9BQY4 288 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 NDC1Q9BTX1 674 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PCBD2Q9H0N5 130 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CDC42EP4Q9H3Q1 356 aaKnown RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 CAB39LQ9H9S4 337 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 SLC6A20Q9NP91 592 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 TXLNGQ9NUQ3 528 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 KCND3Q9UK17 655 aa11.54□□□□□ -0.56
HDAC8-201ENST00000373554 NOVA2Q9UNW9 492 aaKnown RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 MTO1Q9Y2Z2 717 aaKnown RBP11.54□□□□□ -0.56
HDAC8-201ENST00000373554 OR2A25A4D2G3 310 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 NPEPPSL1A6NEC2 478 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 PHGDHO43175 533 aaKnown RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 KATNA1O75449 491 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ACSL3O95573 720 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 AGXTP21549 392 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 RORAP35398 523 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 RAB10P61026 200 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 RPS15P62841 145 aaKnown RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 GRM7Q14831 915 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 EFTUD2Q15029 972 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 TCTE1Q5JU00 501 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 CAPN13Q6MZZ7 669 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 SBSNQ6UWP8 590 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 FRA10AC1Q70Z53 315 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 RNF44Q7L0R7 432 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ADCK2Q7Z695 626 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 LRRC56Q8IYG6 542 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 DSELQ8IZU8 1212 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ZNF655Q8N720 491 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 SLC38A9Q8NBW4 561 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 PROKR1Q8TCW9 393 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 UBL7Q96S82 380 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ZFYVE21Q9BQ24 234 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 DPH2Q9BQC3 489 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 GPR87Q9BY21 358 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 SPRTNQ9H040 489 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ATG10Q9H0Y0 220 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 ACSS3Q9H6R3 686 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 IL17BQ9UHF5 180 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 SNX7Q9UNH6 387 aa11.53□□□□□ -0.56
HDAC8-201ENST00000373554 A0A0J9YVX5 310 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 C9J4A7 227 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 H3BMH7 237 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 CDC7O00311 574 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 SRPX2O60687 465 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 CTSVO60911 334 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 FAM155BO75949 473 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 GUCA1CO95843 209 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 ANXA5P08758 320 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 EZRP15311 586 aaKnown RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 HRH2P25021 359 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 ARSFP54793 590 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 VSX2P58304 361 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 ATP6V0D1P61421 351 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 YBX1P67809 324 aaKnown RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 NAE1Q13564 534 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 TSNQ15631 228 aaKnown RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 ZKSCAN8Q15776 578 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 UAP1Q16222 522 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-201ENST00000373554 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 PTCHD3Q3KNS1 767 aa11.52□□□□□ -0.57
HDAC8-201ENST00000373554 TEX35Q5T0J7 233 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms