RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TAP2Q03519 686 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TSTA3Q13630 321 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 MAPKAPK3Q16644 382 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TMEM259Q4ZIN3 620 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 SPANXN4Q5MJ08 99 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 SLCO4C1Q6ZQN7 724 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TMPRSS11BQ86T26 416 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 PDSS2Q86YH6 399 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 CLHC1Q8NHS4 586 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 DUS3LQ96G46 650 aaKnown RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 APOLD1Q96LR9 279 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TRAPPC9Q96Q05 1148 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TRIM8Q9BZR9 551 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 BRF2Q9HAW0 419 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 SPATA6Q9NWH7 488 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 RPN2P04844 631 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 MYCLP1P12525 358 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 NPPBP16860 134 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 SDC1P18827 310 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 PEX2P28328 305 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 LIPEQ05469 1076 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 DCUN1D3Q8IWE4 304 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 LRRC56Q8IYG6 542 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 RNF175Q8N4F7 328 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 OR2T34Q8NGX1 318 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 TFGQ92734 400 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 REPS1Q96D71 796 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 MTERF1Q99551 399 aaKnown RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 CGREF1Q99674 301 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 KCTD14Q9BQ13 255 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 OSBPL6Q9BZF3 934 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 COPS7BQ9H9Q2 264 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 CCDC177Q9NQR7 707 aaPredicted RBP24.18■■□□□ 1.46
CTSA-203ENST00000372459 TM7SF3Q9NS93 570 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 ACTR3BQ9P1U1 418 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 AP4S1Q9Y587 144 aa24.18■■□□□ 1.46
CTSA-203ENST00000372459 GSK3BP49841 420 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 MRPS21P82921 87 aaKnown RBP24.17■■□□□ 1.46
CTSA-203ENST00000372459 DDX39BQ13838 428 aaKnown RBP24.17■■□□□ 1.46
CTSA-203ENST00000372459 ADGRE1Q14246 886 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 LRRC36Q1X8D7 754 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 NOXRED1Q6NXP6 359 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 OR5AR1Q8NGP9 310 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 METTL2AQ96IZ6 378 aaKnown RBP24.17■■□□□ 1.46
CTSA-203ENST00000372459 FCRL1Q96LA6 429 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 TMEM74Q96NL1 305 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 PREBQ9HCU5 417 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 EGFL7Q9UHF1 273 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 RIMS3Q9UJD0 308 aa24.17■■□□□ 1.46
CTSA-203ENST00000372459 PEX1O43933 1283 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 LYNP07948 512 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 OGFRL1Q5TC84 451 aaPredicted RBP24.16■■□□□ 1.46
CTSA-203ENST00000372459 LCN8Q6JVE9 175 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 MED27Q6P2C8 311 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 HORMAD1Q86X24 394 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 OR7G3Q8NG95 312 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 GTF2H4Q92759 462 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 WDR34Q96EX3 536 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 PPM1MQ96MI6 270 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TSSK3Q96PN8 268 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 COL4A2P08572 1712 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3DA0A087WVF3 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3IA0A087WXS9 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3EA0A087X179 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3KA0A087X1G2 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3FA6NER0 549 aaPredicted RBP24.16■■□□□ 1.46
CTSA-203ENST00000372459 AQP12BA6NM10 295 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3LB9A6J9 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 PI15O43692 258 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3HP0C7X1 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 ATP6V1B2P21281 511 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 SLC7A1P30825 629 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 GRIA3P42263 894 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 ATG9BQ674R7 924 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3GQ6DHY5 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3CQ6IPX1 549 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 PTRH1Q86Y79 214 aaKnown RBP24.16■■□□□ 1.46
CTSA-203ENST00000372459 AQP12AQ8IXF9 295 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 TBC1D3Q8IZP1 549 aaPredicted RBP24.16■■□□□ 1.46
CTSA-203ENST00000372459 PHC3Q8NDX5 983 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 SETD7Q8WTS6 366 aaKnown RBP24.16■■□□□ 1.46
CTSA-203ENST00000372459 SIPA1Q96FS4 1042 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 OR52E6Q96RD3 313 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 EFCAB11Q9BUY7 163 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 EHD1Q9H4M9 534 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 FZD4Q9ULV1 537 aa24.16■■□□□ 1.46
CTSA-203ENST00000372459 C2CD4DB7Z1M9 353 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 PCNAP12004 261 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 TACR1P25103 407 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 PAGE2BQ5JRK9 111 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 IFNEQ86WN2 208 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 OR8J3Q8NGG0 315 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 OR5K2Q8NHB8 316 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 DNASE1L2Q92874 299 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 TESCQ96BS2 214 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 UHRF1Q96T88 793 aaPredicted RBP24.15■■□□□ 1.46
CTSA-203ENST00000372459 EFHD1Q9BUP0 239 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 ACSL5Q9ULC5 683 aa24.15■■□□□ 1.46
CTSA-203ENST00000372459 RUVBL1Q9Y265 456 aaKnown RBP24.15■■□□□ 1.46
CTSA-203ENST00000372459 NCKAP1Q9Y2A7 1128 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms