RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 FEM1AQ9BSK4 669 aa13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 IMP3Q9NV31 184 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 ARL8BQ9NVJ2 186 aa13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
RAPGEF1-202ENST00000372190 FGF1P05230 155 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LINGO3P0C6S8 592 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 EPORP19235 508 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 AFF3P51826 1226 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LRRC32Q14392 662 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 CBX2Q14781 532 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 TIGD3Q6B0B8 471 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 RAD51AP1Q96B01 352 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 FUBP3Q96I24 572 aaKnown RBP eCLIP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 ERVK-5Q9HDB9 667 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 A0A1W2PQ67 120 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 M0R129 80 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LATS1O95835 1130 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 RHOQP17081 205 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 AKT2P31751 481 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 HNRNPH3P31942 346 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 RPL7AP62424 266 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZNF460Q14592 562 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 NADK2Q4G0N4 442 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 NKAPQ8N5F7 415 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 DPCDQ9BVM2 203 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 PCDHGB6Q9Y5F9 930 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 CCDC163A0A0D9SF12 145 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 ATP6AP2A0A1C7CYW4 349 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 F8W036 122 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 J3QRK9 145 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 MEN1O00255 615 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 BLOC1S1P78537 153 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 PFKFB4Q16877 469 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 CBR4Q8N4T8 237 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 FBXL8Q96CD0 374 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLCO1B3Q9NPD5 702 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 XPNPEP1Q9NQW7 623 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 FBXO6Q9NRD1 293 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 F5H0A9 414 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC6A2P23975 617 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LMO2P25791 158 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 CLK3P49761 638 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 NAGLUP54802 743 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 MERTKQ12866 999 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 SPATA6LQ8N4H0 392 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 CELF5Q8N6W0 485 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 OR2T12Q8NG77 320 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LGMNQ99538 433 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 COQ3Q9NZJ6 369 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 YARS2Q9Y2Z4 477 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 E9PI62 339 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 RFPL1O75677 317 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 RGS9O75916 674 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 LCKP06239 509 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 MC4RP32245 332 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 MAGEA3P43357 314 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 MC1RQ01726 317 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 DPY19L3Q6ZPD9 716 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 C9orf43Q8TAL5 461 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 WFIKKN2Q8TEU8 576 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 HMGB4Q8WW32 186 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 PWWP2AQ96N64 755 aa13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 TREX2Q9BQ50 279 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-202ENST00000372190 ATG13O75143 517 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 PEX11AO75192 247 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 GPIP06744 558 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 AQP4P55087 323 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 FAM199XQ6PEV8 388 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 STAG3L4Q8TBR4 150 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 SELENOMQ8WWX9 145 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 CLIP3Q96DZ5 547 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 DHRS1Q96LJ7 313 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 KXD1Q9BQD3 176 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 LGR4Q9BXB1 951 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 TRIM36Q9NQ86 728 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 U3KQV3 271 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 FSCN2O14926 492 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 VIPP01282 170 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ADRA1BP35368 520 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 NAE1Q13564 534 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 ANXA8L1Q5VT79 327 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 GTF2H5Q6ZYL4 71 aa13.73□□□□□ -0.21
RAPGEF1-202ENST00000372190 GALNT13Q8IUC8 556 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms