RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 VAC14Q08AM6 782 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 CDONQ4KMG0 1287 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 HMBOX1Q6NT76 420 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 SPRED2Q7Z698 418 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 TRPV3Q8NET8 790 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 GANCQ8TET4 914 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 ZNF641Q96N77 438 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 BDH2Q9BUT1 245 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 ADNPQ9H2P0 1102 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 IGFLR1Q9H665 355 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 HS3ST2Q9Y278 367 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 GNG14A0A1W2PPG7 69 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ZSCAN5BA6NJL1 495 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 PGRP06401 933 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 NR4A2P43354 598 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ESRRGP62508 458 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 DHRSXQ8N5I4 330 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 DTX3Q8N9I9 347 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 LMNTD1Q8N9Z9 388 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CAPSLQ8WWF8 208 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ZUFSPQ96AP4 578 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CRNNQ9UBG3 495 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 IL36AQ9UHA7 158 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 U3KQV3 271 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 EVPLLA8MZ36 301 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 MYO1GB0I1T2 1018 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TSPAN6O43657 245 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ZNF821O75541 412 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 KRT75O95678 551 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 GPIP06744 558 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 WASP42768 502 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 PWP1Q13610 501 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 BRAT1Q6PJG6 821 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CYP2U1Q7Z449 544 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TICAM1Q8IUC6 712 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CBARPQ8N350 705 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 RMND5AQ9H871 391 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CDH7Q9ULB5 785 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 PIKFYVEQ9Y2I7 2098 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 FNDC1Q4ZHG4 1894 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TBC1D3BA6NDS4 549 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 DEAF1O75398 565 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 C8GP07360 202 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 BCKDHAP12694 445 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TUBA4AP68366 448 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 FOXM1Q08050 763 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ACSM2AQ08AH3 577 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 OXA1LQ15070 435 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 SF1Q15637 639 aaKnown RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 ACSM2BQ68CK6 577 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CFAP206Q8IYR0 622 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 TP63Q9H3D4 680 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-205ENST00000372067 VAPAQ9P0L0 249 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 PADI4Q9UM07 663 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 PCDHA9Q9Y5H5 950 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 CEP290O15078 2479 aa16.59■□□□□ 0.25
VEGFA-205ENST00000372067 NTRK1P04629 796 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 ZNF26P17031 533 aaPredicted RBP16.58■□□□□ 0.25
VEGFA-205ENST00000372067 CSNK1DP48730 415 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 FPGSQ05932 587 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 CYP4F3Q08477 520 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 SNX29P2Q8IUI4 249 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 TBC1D21Q8IYX1 336 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 THAP11Q96EK4 314 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 P2RY13Q9BPV8 354 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 RPF2Q9H7B2 306 aaKnown RBP16.58■□□□□ 0.25
VEGFA-205ENST00000372067 MARCH7Q9H992 704 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 PALMDQ9NP74 551 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 SH3BP4Q9P0V3 963 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 MAGEL2Q9UJ55 1249 aa16.58■□□□□ 0.25
VEGFA-205ENST00000372067 ASPDHA6ND91 283 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 SLC9A3R1O14745 358 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-205ENST00000372067 FKBP9O95302 570 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 COX7A2P14406 83 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 CEBPBP17676 345 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 GPR1P46091 355 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 MLLT10P55197 1068 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 LAPTM5Q13571 262 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 GRIN2CQ14957 1233 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 FKBP9P1Q75LS8 142 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 ADGRG5Q8IZF4 528 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 DEPDC4Q8N2C3 294 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 LILRA3Q8N6C8 439 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-205ENST00000372067 ACAT2Q9BWD1 397 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 C1QTNF3Q9BXJ4 246 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 CROCCQ5TZA2 2017 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 C16orf96A6NNT2 1141 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 EFEMP2O95967 443 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 TPTEP56180 551 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 PPIGQ13427 754 aaKnown RBP eCLIP16.58■□□□□ 0.249e-8■■□□□ 12.1
VEGFA-205ENST00000372067 CEP78Q5JTW2 689 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 LILRA6Q6PI73 481 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 PROSER1Q86XN7 944 aa16.58■□□□□ 0.24
VEGFA-205ENST00000372067 ZNF784Q8NCA9 323 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-205ENST00000372067 FBXL20Q96IG2 436 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms