RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 IL23RQ5VWK5 629 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 REP15Q6BDI9 236 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 LCTLQ6UWM7 567 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 ZFAND4Q86XD8 727 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 DEFB107AQ8IZN7 70 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 KYQ8NBH2 561 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 WDR20Q8TBZ3 569 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 AASDHPPTQ9NRN7 309 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 C1orf109Q9NX04 203 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 TAC3Q9UHF0 121 aa16.24■□□□□ 0.19
PHGDH-202ENST00000369409 PRAMEF33A0A0G2JMD5 474 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 ZNF839A8K0R7 811 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 H0YIV9 168 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 FBP2O00757 339 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 SEC22BO75396 215 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 RSL1D1O76021 490 aaKnown RBP16.23■□□□□ 0.19
PHGDH-202ENST00000369409 G6PDP11413 515 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 PSMB5P28074 263 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 HSD17B2P37059 387 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 CASP2P42575 452 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 UFM1P61960 85 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 STX5Q13190 355 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 E2F2Q14209 437 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 SLBPQ14493 270 aaKnown RBP eCLIP16.23■□□□□ 0.19
PHGDH-202ENST00000369409 ATG9BQ674R7 924 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 ADNP2Q6IQ32 1131 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 DSELQ8IZU8 1212 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 GJD3Q8N144 294 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 RAB42Q8N4Z0 105 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 TEX37Q96LM6 180 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 MTERF1Q99551 399 aaKnown RBP16.23■□□□□ 0.19
PHGDH-202ENST00000369409 MMADHCQ9H3L0 296 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-202ENST00000369409 XKR8Q9H6D3 395 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 MVB12BQ9H7P6 319 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 EFCAB1Q9HAE3 211 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
PHGDH-202ENST00000369409 SNRNP200O75643 2136 aaKnown RBP16.23■□□□□ 0.19
PHGDH-202ENST00000369409 C1GALT1C1LP0DN25 315 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PCNAP12004 261 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 CDH1P12830 882 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 CAPN3P20807 821 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PKLRP30613 574 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 CSTF3Q12996 717 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 MAD2L1Q13257 205 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SMU1Q2TAY7 513 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 CYP20A1Q6UW02 462 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 NXPE4Q6UWF7 544 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ULK2Q8IYT8 1036 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PHACTR4Q8IZ21 702 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 LINC01555Q8NAE3 123 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 OR52E1Q8NGJ3 308 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SETD7Q8WTS6 366 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SMPDL3AQ92484 453 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 WDR34Q96EX3 536 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 HAUS8Q9BT25 410 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 EFCAB11Q9BUY7 163 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 MRPL1Q9BYD6 325 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 TCEAL2Q9H3H9 227 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 GPR27Q9NS67 375 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 TRNAU1APQ9NX07 287 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ZIM2Q9NZV7 527 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 EIF3LQ9Y262 564 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PCDHGA11Q9Y5H2 935 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 DGKBQ9Y6T7 804 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 HEATR5BQ9P2D3 2071 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SPTY2D1-AS1A0A0U1RR47 76 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 A0A1W2PPV9 198 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 PIPSLA2A3N6 862 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 MRASO14807 208 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 RAB28P51157 221 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 YBX1P67809 324 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 MEF2AQ02078 507 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 TBL3Q12788 808 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 GRIK2Q13002 908 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ART3Q13508 389 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 FZD2Q14332 565 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ZNF542PQ5EBM4 170 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 MED27Q6P2C8 311 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 C16orf89Q6UX73 402 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SCUBE1Q8IWY4 988 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 CAMKK1Q8N5S9 505 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 OR7G3Q8NG95 312 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SH3KBP1Q96B97 665 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 RAB11FIP5Q9BXF6 653 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 SPNS1Q9H2V7 528 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 EHD1Q9H4M9 534 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 GEMIN8Q9NWZ8 242 aaKnown RBP16.22■□□□□ 0.19
PHGDH-202ENST00000369409 ICKQ9UPZ9 632 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 HEBP2Q9Y5Z4 205 aa16.22■□□□□ 0.19
PHGDH-202ENST00000369409 GON4LQ3T8J9 2241 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 SERTM1A2A2V5 107 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 NRP2O60462 931 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 SLC22A3O75751 556 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 TNFP01375 233 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 PRPH2P23942 346 aa16.21■□□□□ 0.19
PHGDH-202ENST00000369409 ZFP36L2P47974 494 aaKnown RBP16.21■□□□□ 0.19
PHGDH-202ENST00000369409 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
PHGDH-202ENST00000369409 ZNF33BQ06732 778 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms