RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 NSG1P42857 185 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 HK2P52789 917 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PGGT1BP53609 377 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CFHR1Q03591 330 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 IL10RAQ13651 578 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ENPP2Q13822 863 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PLK5Q496M5 336 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 FAM46CQ5VWP2 391 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PTRHD1Q6GMV3 140 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 TMEM207Q6UWW9 146 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 MACC1Q6ZN28 852 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ZCCHC23Q6ZST2 131 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CCDC121Q6ZUS5 278 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ZNF765Q7L2R6 523 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 HDDC3Q8N4P3 179 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PNPLA1Q8N8W4 532 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CEP76Q8TAP6 659 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ANKRD49Q8WVL7 239 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 TRIM63Q969Q1 353 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CHFRQ96EP1 664 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 APIPQ96GX9 242 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 GPR21Q99679 349 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 P2RY13Q9BPV8 354 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ZSCAN5AQ9BUG6 496 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 NUSAP1Q9BXS6 441 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 MTG2Q9H4K7 406 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 STN1Q9H668 368 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 NCKIPSDQ9NZQ3 722 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 MED16Q9Y2X0 877 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 LRRK1Q38SD2 2015 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 IGLV3-16A0A075B6K0 115 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 GNB5O14775 395 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 CHRM3P20309 590 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 STT3AP46977 705 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 MAP2K6P52564 334 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 MAPK10P53779 464 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 CCDC15Q0P6D6 951 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 RALGDSQ12967 914 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 IFT88Q13099 833 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 MYBPC3Q14896 1274 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 LRRC73Q5JTD7 316 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 TRPM8Q7Z2W7 1104 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 PIWIL4Q7Z3Z4 852 aaKnown RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 LIX1LQ8IVB5 337 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 NRSN1Q8IZ57 195 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 TRAM1L1Q8N609 369 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 CD200R1Q8TD46 325 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 ASB15Q8WXK1 588 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 RAB7BQ96AH8 199 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 TBC1D20Q96BZ9 403 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 PANX3Q96QZ0 392 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 COPS8Q99627 209 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 RPP25Q9BUL9 199 aaKnown RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 FAM83DQ9H4H8 585 aa8.55□□□□□ -1.04
TPM3-213ENST00000368545 TFB2MQ9H5Q4 396 aaKnown RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
TPM3-213ENST00000368545 CCT8L1PA6NM43 557 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SYCE1LA8MT33 242 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 QSOX1O00391 747 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 RNASEH1O60930 286 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 KERAO60938 352 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SMIM24O75264 130 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 NIPSNAP2O75323 286 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 IPO13O94829 963 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 HSPA4LO95757 839 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ADRB3P13945 408 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 CLCN7P51798 805 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 RAB1AP62820 205 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 OVGP1Q12889 678 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 MALLQ13021 153 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 RCN2Q14257 317 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ZNF284Q2VY69 593 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ATP13A5Q4VNC0 1218 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 HENMT1Q5T8I9 393 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 CES4AQ5XG92 561 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 PAQR3Q6TCH7 311 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 LIPIQ6XZB0 460 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ISCA2Q86U28 154 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SFTPA1Q8IWL2 248 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 GALNT15Q8N3T1 639 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ZNF843Q8N446 348 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SPATA6LQ8N4H0 392 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 STAG3L4Q8TBR4 150 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SPATA16Q9BXB7 569 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 DRC3Q9H069 523 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 ALG9Q9H6U8 611 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 PRSS16Q9NQE7 514 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 EBF1Q9UH73 591 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 SARDHQ9UL12 918 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 TMCO1Q9UM00 188 aa8.54□□□□□ -1.04
TPM3-213ENST00000368545 NDRG2Q9UN36 371 aaKnown RBP8.54□□□□□ -1.04
TPM3-213ENST00000368545 DHRS7Q9Y394 339 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms