RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 WARS2Q9UGM6 360 aaKnown RBP17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 CLIC1O00299 241 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 LILRB3O75022 631 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 ARHGEF15O94989 841 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 FTH1P02794 183 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 ENGP17813 658 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 WEE1P30291 646 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 GBX1Q14549 363 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 CCSMST1Q4G0I0 132 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 GGTA1PQ4G0N0 100 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 CLECL1Q8IZS7 167 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 CNIH3Q8TBE1 160 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 TANKQ92844 425 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 MED8Q96G25 268 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 RDH12Q96NR8 316 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 TUBA1CQ9BQE3 449 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 PCDH12Q9NPG4 1184 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 USE1Q9NZ43 259 aa17.56■□□□□ 0.4
UBQLN4-201ENST00000368309 EVPLLA8MZ36 301 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 hCG_2039718K7EN88 272 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 FPGTO14772 594 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 WNT9AO14904 365 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 TFPTP0C1Z6 253 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 HOXB9P17482 250 aaPredicted RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CCNA2P20248 432 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 ISL1P61371 349 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 SIM2Q14190 667 aaPredicted RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 VTCN1Q7Z7D3 282 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CHPFQ8IZ52 775 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CYB5D2Q8WUJ1 264 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 ZNF641Q96N77 438 aaPredicted RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 AP3M1Q9Y2T2 418 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 COL4A6Q14031 1691 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 XPNPEP2O43895 674 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 FKTNO75072 461 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 SEC14L2O76054 403 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 MAPK1P28482 360 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 PLA2G16P53816 162 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 NFATC3Q12968 1075 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 UGT8Q16880 541 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CEP68Q76N32 757 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CYP4Z1Q86W10 505 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 TBC1D15Q8TC07 691 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 CSF3RQ99062 836 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 TMEM39AQ9NV64 488 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 VPS4AQ9UN37 437 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 YY2O15391 372 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 SGTAO43765 313 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 MAN1A2O60476 641 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 PARNO95453 639 aaKnown RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 PREPP48147 710 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 MYBPC3Q14896 1274 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 DNAJB8Q8NHS0 232 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 MIPOL1Q8TD10 442 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 RIOK2Q9BVS4 552 aaKnown RBP17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 MAGIXQ9H6Y5 334 aa17.55■□□□□ 0.4
UBQLN4-201ENST00000368309 E7EQ34 232 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 COX7A2P14406 83 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 JUPP14923 745 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 GRSF1Q12849 480 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 NAE1Q13564 534 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 PLEKHS1Q5SXH7 462 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 CPZQ66K79 652 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 MYOCQ99972 504 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 BTBD3Q9Y2F9 522 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 LEFTY1O75610 366 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 MPC1LP0DKB6 136 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 POLR2LP62875 67 aaKnown RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 IL5RAQ01344 420 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 EPS8Q12929 822 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 RAPSNQ13702 412 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ARSIQ5FYB1 569 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ASZ1Q8WWH4 475 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 NRBF2Q96F24 287 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 RC3H2Q9HBD1 1191 aaKnown RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ASAH2Q9NR71 780 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 PAK1IP1Q9NWT1 392 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 TMED5Q9Y3A6 229 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ARHGEF33A8MVX0 844 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 EIF3FO00303 357 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 XYLBO75191 536 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 FGF18O76093 207 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 CXCL14O95715 111 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 JUNBP17275 347 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 FSHRP23945 695 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 RECQLP46063 649 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 DPY19L1Q2PZI1 675 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 TTC23LQ6PF05 361 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ZNF366Q8N895 744 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 KREMEN2Q8NCW0 462 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 PAK6Q9NQU5 681 aaPredicted RBP17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 VPS29Q9UBQ0 182 aa17.54■□□□□ 0.4
UBQLN4-201ENST00000368309 ORC6Q9Y5N6 252 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms