RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 EPN2O95208 641 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZNF682O95780 498 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 SRCP12931 536 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ATP1B2P14415 290 aaPredicted RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 GPX2P18283 190 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 HTR1BP28222 390 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 IL5RAQ01344 420 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 PTSQ03393 145 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 OCA2Q04671 838 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 RAPSNQ13702 412 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZNF846Q147U1 533 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ANKRD34AQ69YU3 496 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 C22orf39Q6P5X5 142 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CYP2U1Q7Z449 544 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ANKRD46Q86W74 232 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZZZ3Q8IYH5 903 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 SLC15A4Q8N697 577 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 OR8J2Q8NGG1 315 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 BHMTQ93088 406 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 APIPQ96GX9 242 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 TMEM169Q96HH4 297 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 APOLD1Q96LR9 279 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 ZNF347Q96SE7 839 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 DUSP21Q9H596 190 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 LTB4R2Q9NPC1 389 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 PAK1IP1Q9NWT1 392 aaPredicted RBP13.88□□□□□ -0.19
CD48-201ENST00000368045 SCN3BQ9NY72 215 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 VNN3Q9NY84 501 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 GPRC5BQ9NZH0 403 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 CFAP97Q9P2B7 532 aa13.88□□□□□ -0.19
CD48-201ENST00000368045 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 CLIC1O00299 241 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 FPGTO14772 594 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 JRKO75564 520 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 FKBP9O95302 570 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 POP4O95707 220 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 FABP3P05413 133 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 URODP06132 367 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 HSD3B1P14060 373 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 LHCGRP22888 699 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 PPIBP23284 216 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 HSD3B2P26439 372 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 CD70P32970 193 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 SPINT3P49223 89 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 NEK2P51955 445 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 MAPK10P53779 464 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 MVKQ03426 396 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 VEZF1Q14119 521 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 NR1D2Q14995 579 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 ZXDCQ2QGD7 858 aaPredicted RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 OR4F3Q6IEY1 312 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 ZCCHC8Q6NZY4 707 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 EIF3MQ7L2H7 374 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 GPR155Q7Z3F1 870 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 PIWIL3Q7Z3Z3 882 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 SYT12Q8IV01 421 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 SVOPQ8N4V2 548 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 ABHD11Q8NFV4 315 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 FAR1Q8WVX9 515 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 RORBQ92753 470 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 VOPP1Q96AW1 172 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 DGCR6LQ9BY27 220 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 ASPSCR1Q9BZE9 553 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 INTS6Q9UL03 887 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 RUVBL1Q9Y265 456 aaKnown RBP13.87□□□□□ -0.19
CD48-201ENST00000368045 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 DNAH12Q6ZR08 3092 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 PCNTO95613 3336 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 COL4A6Q14031 1691 aa13.87□□□□□ -0.19
CD48-201ENST00000368045 ANKRD12Q6UB98 2062 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 A8MX80 341 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SULT1C4O75897 302 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 GNRH1P01148 92 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 UGT2B4P06133 528 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 C1SP09871 688 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 OCM2P0CE71 109 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 OCMP0CE72 109 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 BMP1P13497 986 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 ACVR2AP27037 513 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 KDELR2P33947 212 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 HALP42357 657 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 PHEXP78562 749 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 KCNC4Q03721 635 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 EMX1Q04741 257 aaPredicted RBP13.86□□□□□ -0.19
CD48-201ENST00000368045 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 SPCS2Q15005 226 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 CTF1Q16619 201 aa13.86□□□□□ -0.19
CD48-201ENST00000368045 RGS21Q2M5E4 152 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms