RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PDLIM5Q96HC4 596 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 REXO5Q96IC2 774 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 C8orf48Q96LL4 319 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NSUN5Q96P11 429 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TRIB3Q96RU7 358 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NODALQ96S42 347 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 MBOAT4Q96T53 435 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 CSF3RQ99062 836 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 HGH1Q9BTY7 390 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 TRIT1Q9H3H1 467 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 TOR3AQ9H497 397 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 EPS8L2Q9H6S3 715 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 RMND5AQ9H871 391 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 NDFIP2Q9NV92 336 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 INTS7Q9NVH2 962 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 PAK1IP1Q9NWT1 392 aaPredicted RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 TRPM5Q9NZQ8 1165 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 MMP17Q9ULZ9 603 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 SCML2Q9UQR0 700 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 BTRCQ9Y297 605 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 CRYL1Q9Y2S2 319 aa11.23□□□□□ -0.61
USF1-201ENST00000368019 FAM32AQ9Y421 112 aaKnown RBP11.23□□□□□ -0.61
USF1-201ENST00000368019 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 E2F6O75461 281 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 RSL1D1O76021 490 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 RECQL5O94762 991 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 SLC4A1P02730 911 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 CYP17A1P05093 508 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 HTR1AP08908 422 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 IGF2RP11717 2491 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 IL12AP29459 219 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 CD40LGP29965 261 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 OPRL1P41146 370 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 PPP3CCP48454 512 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TMED10P49755 219 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 DGKEP52429 567 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TPD52P55327 224 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 ISL1P61371 349 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 MRPS21P82921 87 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 FADDQ13158 208 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 AQP6Q13520 282 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 ATP1A4Q13733 1029 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SEMA3AQ14563 771 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 KIAA0040Q15053 153 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TAF1AQ15573 450 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 CTF1Q16619 201 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TIGD2Q4W5G0 525 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SETMARQ53H47 684 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 PYCR3Q53H96 274 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SYT6Q5T7P8 510 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 PIK3R6Q5UE93 754 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 ATG9BQ674R7 924 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TMEM214Q6NUQ4 689 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 UGT3A1Q6NUS8 523 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SCD5Q86SK9 330 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 C14orf80Q86SX3 495 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 PLPP6Q8IY26 295 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 FAM9CQ8IZT9 166 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 EID3Q8N140 333 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 ZCCHC7Q8N3Z6 543 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 TMCO5AQ8N6Q1 288 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TTC16Q8NEE8 873 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 ZNF548Q8NEK5 533 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 TSTD1Q8NFU3 115 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 EXT2Q93063 718 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TAMM41Q96BW9 452 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 CDKN2AIPNLQ96HQ2 116 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 ZBTB18Q99592 522 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SEPHS2Q99611 448 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 C19orf43Q9BQ61 176 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SP140LQ9H930 580 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 SEMA4BQ9NPR2 832 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 OLA1Q9NTK5 396 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 TRNAU1APQ9NX07 287 aaKnown RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 KIAA1522Q9P206 1035 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 GIMAP2Q9UG22 337 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 INVSQ9Y283 1065 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 MED16Q9Y2X0 877 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 PCDHGA8Q9Y5G5 932 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 PTGDR2Q9Y5Y4 395 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 GPC6Q9Y625 555 aaPredicted RBP11.22□□□□□ -0.61
USF1-201ENST00000368019 A3GALT2U3KPV4 340 aa11.22□□□□□ -0.61
USF1-201ENST00000368019 FAM208BQ5VWN6 2430 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 CACNA1EQ15878 2313 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 MN1Q10571 1320 aaPredicted RBP11.21□□□□□ -0.61
USF1-201ENST00000368019 LNP1A1A4G5 178 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 TMEM247A6NEH6 219 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 C4orf47A7E2U8 309 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 J3QRK9 145 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 E2F3O00716 465 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 PPP6CO00743 305 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 AQP9O43315 295 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 PRAMEF11O60813 436 aa11.21□□□□□ -0.61
USF1-201ENST00000368019 JRKO75564 520 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms