RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SNX3O60493 162 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RBL1P28749 1068 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RPL4P36578 427 aaKnown RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RAB7AP51149 207 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 SMIM11AP58511 58 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RAB39AQ14964 217 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 MLC1Q15049 377 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 PAN3Q58A45 887 aaKnown RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 AKR1C8PQ5T2L2 129 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF227Q86WZ6 799 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 SLC43A2Q8N370 569 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 SGCDQ92629 289 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 NMRAL1Q9HBL8 299 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RAB9BQ9NP90 201 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 MAT2BQ9NZL9 334 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 WASF3Q9UPY6 502 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 PP2D1A8MPX8 630 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 CLDN25C9JDP6 229 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 NR2F1P10589 423 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 ARSFP54793 590 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 AIF1P55008 147 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 GLO1Q04760 184 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 MGAT5Q09328 741 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 SMUG1Q53HV7 270 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 TOR1AIP1Q5JTV8 583 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 N4BP2L1Q5TBK1 243 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 ZCCHC12Q6PEW1 402 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 POTEHQ6S545 545 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 ETNPPLQ8TBG4 499 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 TOP1MTQ969P6 601 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 OR2M4Q96R27 311 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 ACBD6Q9BR61 282 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 TBL1XR1Q9BZK7 514 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 MAGEE1Q9HCI5 957 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 DYNLRB1Q9NP97 96 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 PRDM8Q9NQV8 689 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 CISHQ9NSE2 258 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 PLAGL2Q9UPG8 496 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 RIPK3Q9Y572 518 aa8.45□□□□□ -1.06
SYNE1-206ENST00000367253 COL22A1Q8NFW1 1626 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-206ENST00000367253 A0A0B4J203 849 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 IQCMA0A1B0GVH7 501 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 KMOO15229 486 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CYB5BO43169 146 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZSCAN5DPP0CG00 497 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 NCF1P14598 390 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 NT5EP21589 574 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 BRCC3P46736 316 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 EEFSECP57772 596 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 UBE2NP61088 152 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SLC13A2Q13183 592 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF792Q3KQV3 632 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 MBLAC2Q68D91 279 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C11orf63Q6NUN7 778 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ABHD13Q7L211 337 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 TMEM17Q86X19 198 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZC3H7AQ8IWR0 971 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 OFCC1Q8IZS5 231 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 EIF1ADQ8N9N8 165 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 OR7G2Q8NG99 324 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CYP2W1Q8TAV3 490 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 NANPQ8TBE9 248 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SLC25A36Q96CQ1 311 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C11orf24Q96F05 449 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 TCF12Q99081 682 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CCDC167Q9P0B6 97 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PCDHB14Q9Y5E9 798 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 POMT1Q9Y6A1 747 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ERI2A8K979 691 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 A8MVJ9 347 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 HACD1B0YJ81 288 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CSDE1O75534 798 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 AGFG2O95081 481 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CSN2P05814 226 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 LPOP22079 712 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 OTX2P32243 289 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 HTR2BP41595 481 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CDK7P50613 346 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 NKX2-5P52952 324 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 EEF1A1P68104 462 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 EEF1A2Q05639 463 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF844Q08AG5 666 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RASGEF1BQ0VAM2 473 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PARP15Q460N3 678 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 EEF1A1P5Q5VTE0 462 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ARMC8Q8IUR7 673 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF561Q8N587 486 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 FNDC5Q8NAU1 212 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 LILRB1Q8NHL6 650 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 TNFAIP8L1Q8WVP5 186 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 AURKBQ96GD4 344 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C12orf42Q96LP6 360 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C12orf65Q9H3J6 166 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ACTR10Q9NZ32 417 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 UPB1Q9UBR1 384 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms