RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NEK6Q9HC98 313 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 NHSL1Q5SYE7 1610 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 A0A1B0GVM2 712 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 SERPINB7O75635 380 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ELNP15502 786 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 FPR1P21462 350 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 CNTN1Q12860 1018 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 FAM214AQ32MH5 1076 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ATAD3BQ5T9A4 648 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ARRDC2Q8TBH0 407 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 CHPT1Q8WUD6 406 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 KCNJ9Q92806 393 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 TRNT1Q96Q11 434 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 YME1L1Q96TA2 773 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 TTPALQ9BTX7 342 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 DUSP26Q9BV47 211 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 COMMD3Q9UBI1 195 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 SAGE2PA6NJ88 616 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ADAM23O75077 832 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 PDYNP01213 254 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 BMP4P12644 408 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 PSMA1P25786 263 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 C2orf80Q0P641 193 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ZZZ3Q8IYH5 903 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 SUSD3Q96L08 255 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF583Q96ND8 569 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 POLR2J2Q9GZM3 115 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 ENPP5Q9UJA9 477 aa13.3□□□□□ -0.28
SGMS1-202ENST00000361781 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
SGMS1-202ENST00000361781 A0A0G2JN53 185 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF701M0R085 212 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 PTNP21246 168 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 GATMP50440 423 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ABHD18Q0P651 414 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 SOWAHCQ53LP3 525 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 NEK10Q6ZWH5 1172 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ARMCX6Q7L4S7 300 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 CADM3Q8N126 398 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 C1orf52Q8N6N3 182 aaKnown RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF614Q8N883 585 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 CD200R1Q8TD46 325 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 TSPEARQ8WU66 669 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 KCTD5Q9NXV2 234 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF624Q9P2J8 865 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 SSR3Q9UNL2 185 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 H7C4K7 107 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 SERPINI2O75830 405 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 CCNDBP1O95273 360 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 C7P10643 843 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 PABPC1P11940 636 aaKnown RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 CDH4P55283 916 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZSWIM7Q19AV6 140 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 RNF180Q86T96 592 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ARL14EPQ8N8R7 260 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 KAT2AQ92830 837 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ALPK1Q96QP1 1244 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 FEVQ99581 238 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 OSGEPL1Q9H4B0 414 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ABCG2Q9UNQ0 655 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 BRCA2P51587 3418 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 FAM240BA0A1B0GVZ2 78 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 TGFB1P01137 390 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 RPS17P08708 135 aaKnown RBP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 KDELR2P33947 212 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 GSTM5P46439 218 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ACOX1Q15067 660 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 QPRTQ15274 297 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 KCNA10Q16322 511 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 USP45Q70EL2 814 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 ADGRG2Q8IZP9 1017 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 DTX3Q8N9I9 347 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 TP53INP1Q96A56 240 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 RNFT2Q96EX2 444 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 AMBRA1Q9C0C7 1298 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 TVP23BQ9NYZ1 205 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 DNAJC27Q9NZQ0 273 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 SLC9A8Q9Y2E8 581 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 PEX16Q9Y5Y5 336 aa13.29□□□□□ -0.28
SGMS1-202ENST00000361781 AQP9O43315 295 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms