RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 VTCN1Q7Z7D3 282 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 UBQLNLQ8IYU4 475 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 OR51D1Q8NGF3 324 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TM9SF2Q99805 663 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 EI24O14681 340 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TGM6O95932 706 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TGFB2P61812 414 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 KHDC1Q4VXA5 237 aaKnown RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 C2orf92A0A1B0GVN3 265 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SEPT4O43236 478 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 UQCRC1P31930 480 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 PIAS4Q8N2W9 510 aaPredicted RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ADAD1Q96M93 576 aaKnown RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 RFPL1O75677 317 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 MARCKSL1P49006 195 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 UAP1L1Q3KQV9 507 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 WSCD1Q658N2 575 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 POGLUT1Q8NBL1 392 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM45AQ9NWC5 275 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TAS2R50P59544 299 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SLC18A2Q05940 514 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SLC3A1Q07837 685 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 IKBKEQ14164 716 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 AKR1C8PQ5T2L2 129 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ZER1Q7Z7L7 766 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 PHOX2BQ99453 314 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 CCDC106Q9BWC9 280 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ADH1AP07327 375 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 CYP3A4P08684 503 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 HTR1AP08908 422 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 HOXD8P13378 290 aaPredicted RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 CTHP32929 405 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 WNT3AP56704 352 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 HERVK_113P63132 956 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ERVK-8P63133 956 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 FOXM1Q08050 763 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 COPS5Q92905 334 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ORAI3Q9BRQ5 295 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ERVK-6Q9BXR3 956 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 C12orf65Q9H3J6 166 aaKnown RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM185BQ9H7F4 350 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ASTN1O14525 1302 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 A8MVJ9 347 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SFTPBP07988 381 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 IL3P08700 152 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 GSTM2P28161 218 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 ATAT1Q5SQI0 421 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 MAELQ96JY0 434 aaKnown RBP9.09□□□□□ -0.95
VPS13A-203ENST00000360280 SNX10Q9Y5X0 201 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 DIP2AQ14689 1571 aa9.09□□□□□ -0.95
VPS13A-203ENST00000360280 FLRT2O43155 660 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 TDGQ13569 410 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF280BQ86YH2 543 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 ZFPM1Q8IX07 1006 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 SLC22A17Q8WUG5 538 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 LHX5Q9H2C1 402 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 ERVK-18Q9QC07 812 aa9.09□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3DA0A087WVF3 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3IA0A087WXS9 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3EA0A087X179 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3KA0A087X1G2 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 ANKRD33BA6NCL7 494 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3FA6NER0 549 aaPredicted RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3LB9A6J9 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 MT-ND5P03915 603 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3HP0C7X1 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 HCAR3P49019 387 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3GQ6DHY5 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3CQ6IPX1 549 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF773Q6PK81 442 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBC1D3Q8IZP1 549 aaPredicted RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 PHTF2Q8N3S3 785 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 LNX2Q8N448 690 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 LRRC52Q8N7C0 313 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 DUSP9Q99956 384 aaKnown RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 HEPHQ9BQS7 1158 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 PPRC1Q5VV67 1664 aaKnown RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 FBP2O00757 339 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 MAGEA3P43357 314 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 MAGEA8P43361 318 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 C1QTNF8P60827 252 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 RPL7AP62424 266 aaKnown RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 SYT16Q17RD7 645 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 SH3PXD2AQ5TCZ1 1133 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 RHBDF2Q6PJF5 856 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 FAM83HQ6ZRV2 1179 aaPredicted RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 MMP27Q9H306 513 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TAS2R9Q9NYW1 312 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 NUFIP1Q9UHK0 495 aaKnown RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 ERVW-1Q9UQF0 538 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 SH3PXD2BA1X283 911 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 LGR5O75473 907 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 INTS6LQ5JSJ4 861 aaKnown RBP9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM80Q96HE8 168 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF558Q96NG5 402 aa9.08□□□□□ -0.96
VPS13A-203ENST00000360280 TBX5Q99593 518 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms