RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IGKV1-8A0A0C4DH67 115 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 C2orf74A8MZ97 194 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 PVRP15151 417 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 PRKAA1Q13131 559 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 SF1Q15637 639 aaKnown RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 TRIP6Q15654 476 aaKnown RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 KIAA1614Q5VZ46 1190 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 ICE2Q659A1 982 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 ZNF574Q6ZN55 896 aaPredicted RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 OR2L3Q8NG85 312 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 OR6Y1Q8NGX8 325 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 NEIL2Q969S2 332 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 PRR11Q96HE9 360 aaPredicted RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 ZNF395Q9H8N7 513 aaPredicted RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 SLC6A20Q9NP91 592 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 SEMA4BQ9NPR2 832 aaPredicted RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 INTS9Q9NV88 658 aaKnown RBP24.47■■□□□ 1.51
SSBP3-202ENST00000357475 KLHL3Q9UH77 587 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 PCDHB11Q9Y5F2 797 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 CEP250Q9BV73 2442 aa24.47■■□□□ 1.51
SSBP3-202ENST00000357475 E7EQ34 232 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 PRAMEF10O60809 474 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 PDK4Q16654 411 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 ARMC6Q6NXE6 501 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 KLHL35Q6PF15 583 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 SPESP1Q6UW49 350 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 LCTLQ6UWM7 567 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 DCBLD1Q8N8Z6 715 aa24.46■■□□□ 1.51
SSBP3-202ENST00000357475 SPAARA0A1B0GVQ0 90 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 OR7A17O14581 309 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 GIPC1O14908 333 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 GP1BAP07359 652 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 CCND1P24385 295 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 GYS2P54840 703 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 CDC16Q13042 620 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 CATSPEREQ5SY80 951 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 OR52B6Q8NGF0 335 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 TRPC4APQ8TEL6 797 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 MAP3K3Q99759 626 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 ZMYND15Q9H091 742 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 NOL11Q9H8H0 719 aaKnown RBP24.45■■□□□ 1.51
SSBP3-202ENST00000357475 ENTPD2Q9Y5L3 495 aa24.45■■□□□ 1.51
SSBP3-202ENST00000357475 CDH1P12830 882 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 CLDN6P56747 220 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 CLCQ05315 142 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 PRDX1Q06830 199 aaKnown RBP24.45■■□□□ 1.5
SSBP3-202ENST00000357475 FRMD7Q6ZUT3 714 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 FAM76AQ8TAV0 307 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 CDK15Q96Q40 435 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 SHCBP1LQ9BZQ2 653 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 C20orf27Q9GZN8 174 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 RAB33BQ9H082 229 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 EPB41L1Q9H4G0 881 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 IPPKQ9H8X2 491 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 EPHA6Q9UF33 1036 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 ANGPTL3Q9Y5C1 460 aa24.45■■□□□ 1.5
SSBP3-202ENST00000357475 MN1Q10571 1320 aaPredicted RBP24.44■■□□□ 1.5
SSBP3-202ENST00000357475 NTN3O00634 580 aaPredicted RBP24.44■■□□□ 1.5
SSBP3-202ENST00000357475 UBFD1O14562 309 aaKnown RBP24.44■■□□□ 1.5
SSBP3-202ENST00000357475 ITM2AO43736 263 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 LYPLA1O75608 230 aaPredicted RBP24.44■■□□□ 1.5
SSBP3-202ENST00000357475 CHRNGP07510 517 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 EPB42P16452 691 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 SQSTM1Q13501 440 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 SNAP47Q5SQN1 464 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 GLRX5Q86SX6 157 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 SLCO6A1Q86UG4 719 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 LSMEM2Q8N112 164 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 PPP4R1Q8TF05 950 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 SLC22A18Q96BI1 424 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 HAUS8Q9BT25 410 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 SPNS1Q9H2V7 528 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 TNFRSF12AQ9NP84 129 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 DYRK1BQ9Y463 629 aa24.44■■□□□ 1.5
SSBP3-202ENST00000357475 ADAMTS20P59510 1910 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 CPNE6O95741 557 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 C9P02748 559 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 NEFHP12036 1026 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 ST6GAL1P15907 406 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 VARSP26640 1264 aaKnown RBP24.43■■□□□ 1.5
SSBP3-202ENST00000357475 SLC5A12Q1EHB4 618 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 CFAP157Q5JU67 520 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 TTC19Q6DKK2 380 aaPredicted RBP24.43■■□□□ 1.5
SSBP3-202ENST00000357475 WDR74Q6RFH5 385 aaPredicted RBP24.43■■□□□ 1.5
SSBP3-202ENST00000357475 TMPRSS11BQ86T26 416 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 SLC5A11Q8WWX8 675 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 PCBD2Q9H0N5 130 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 SEMA6CQ9H3T2 930 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 MRPS30Q9NP92 439 aaKnown RBP24.43■■□□□ 1.5
SSBP3-202ENST00000357475 ZNF225Q9UK10 706 aa24.43■■□□□ 1.5
SSBP3-202ENST00000357475 IGHV5-51A0A0C4DH38 117 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 H7BY64 318 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 MATN2O00339 956 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 SLC30A4O14863 429 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 RFPL3O75679 317 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 CD22P20273 847 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 MAGP20916 626 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 GRIA3P42263 894 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 MEF2AQ02078 507 aaPredicted RBP24.42■■□□□ 1.5
SSBP3-202ENST00000357475 GUCY1A3Q02108 690 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms