RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 IGFBP5P24593 272 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 DPP4P27487 766 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 LIPEQ05469 1076 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 DLG1Q12959 904 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 RBM20Q5T481 1227 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FSTL4Q6MZW2 842 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 TMED4Q7Z7H5 227 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KCTD13Q8WZ19 329 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CHFRQ96EP1 664 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SERTAD3Q9UJW9 196 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 A8MV72 311 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 HSPA12AO43301 675 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FOXD2O60548 495 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 NR2F6P10588 404 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 RHOQP17081 205 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 GABRA3P34903 492 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ANXA8L1Q5VT79 327 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ZDHHC21Q8IVQ6 265 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 JAGN1Q8N5M9 183 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 DENND6BQ8NEG7 585 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 OR4F6Q8NGB9 312 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SOX17Q9H6I2 414 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 DKKL1Q9UK85 242 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ANKRD6Q9Y2G4 727 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 EOMESO95936 686 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 PRH1P02810 166 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MYF5P13349 255 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SIM1P81133 766 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FAM174BQ3ZCQ3 159 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 NKAPLQ5M9Q1 402 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 VTCN1Q7Z7D3 282 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MAPK15Q8TD08 544 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 LRRC58Q96CX6 371 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 METTL8Q9H825 291 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ZCCHC11Q5TAX3 1644 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 A0A1W2PRG6 482 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SCDO00767 359 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CDH1P12830 882 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ENGP17813 658 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CACNG1Q06432 222 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 NPRL2Q8WTW4 380 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 TDRD1Q9BXT4 1180 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 TNFRSF19Q9NS68 423 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 BCL9O00512 1426 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 HAT1O14929 419 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 NADKO95544 446 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MPIP34949 423 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ARL2P36404 184 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CCL11P51671 97 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FAM189BP81408 668 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 PARP15Q460N3 678 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KCTD9Q7L273 389 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ZNF676Q8N7Q3 588 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MRPL57Q9BQC6 102 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 HEBP1Q9NRV9 189 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FNIP2Q9P278 1114 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ADGRA3Q8IWK6 1321 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 H3BML4 177 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 LEFTY1O75610 366 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MATN1P21941 496 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KIR3DL1P43629 444 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 RPS14P62263 151 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KCNAB2Q13303 367 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 DUS1LQ6P1R4 473 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 FBXO42Q6P3S6 717 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 BHLHB9Q6PI77 547 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 NUP54Q7Z3B4 507 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MKKSQ9NPJ1 570 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ZDHHC2Q9UIJ5 367 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MRTO4Q9UKD2 239 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SSX5O60225 188 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 AK4P27144 223 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SLC26A5P58743 744 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 PPP3R1P63098 170 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 ELF3P78545 371 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 TBC1D21Q8IYX1 336 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CTRCQ99895 268 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 C12orf4Q9NQ89 552 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 STOML2Q9UJZ1 356 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CCDC182A6NF36 153 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 MAGEB17A8MXT2 336 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 G3V3Y1 287 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CLIC3O95833 236 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 GRIK2Q13002 908 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KANK2Q63ZY3 851 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 LIN54Q6MZP7 749 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 SLC39A5Q6ZMH5 540 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 AMIGO1Q86WK6 493 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 CCDC71Q8IV32 467 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 S100ZQ8WXG8 99 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 UBE2E3Q969T4 207 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 PTCD3Q96EY7 689 aaKnown RBP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS13A-202ENST00000357409 KCMF1Q9P0J7 381 aa7.17□□□□□ -1.26
VPS13A-202ENST00000357409 A0A1W2PQU0 124 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms