RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 GTF2H4Q92759 462 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PPCDCQ96CD2 204 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 LGALS12Q96DT0 336 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 RDH12Q96NR8 316 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 IL4I1Q96RQ9 567 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 C11orf16Q9NQ32 467 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 ABCB8Q9NUT2 735 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 ERGIC3Q9Y282 383 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 DLGAP4Q9Y2H0 992 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 NEDD8-MDP1E9PL57 170 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 HPRP00739 348 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PRPS1L1P21108 318 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 HTR1BP28222 390 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 GTF2E2P29084 291 aaKnown RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 HMGCLP35914 325 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 STK19P49842 368 aaPredicted RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 RAB15P59190 212 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 POLR2LP62875 67 aaKnown RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 CDK5R2Q13319 367 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 DSC3Q14574 896 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 CLCA4Q14CN2 919 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 TIMM50Q3ZCQ8 353 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 SETMARQ53H47 684 aaPredicted RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 PYCR3Q53H96 274 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PDZK1Q5T2W1 519 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 C6orf183Q5T699 404 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 KIAA1614Q5VZ46 1190 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 DCP2Q8IU60 420 aaKnown RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 NXPE1Q8N323 547 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 OR10G2Q8NGC3 310 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 OR4K1Q8NGD4 311 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PIH1D2Q8WWB5 315 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 STARD8Q92502 1023 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 MAL2Q969L2 176 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 MTERF3Q96E29 417 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 OSBPL10Q9BXB5 764 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 BRINP2Q9C0B6 783 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PAK1IP1Q9NWT1 392 aaPredicted RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 CLN6Q9NWW5 311 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 SPG21Q9NZD8 308 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 IL17CQ9P0M4 197 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 VPS29Q9UBQ0 182 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 CAB39Q9Y376 341 aaPredicted RBP6.65□□□□□ -1.35
RTN4-203ENST00000357376 OARD1Q9Y530 152 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 PRSS21Q9Y6M0 314 aa6.65□□□□□ -1.35
RTN4-203ENST00000357376 ARID2Q68CP9 1835 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 KRBA1A5PL33 1030 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DRGXA6NNA5 263 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TPST2O60704 377 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 B3GALT4O96024 378 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SGSHP51688 502 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CLCN4P51793 760 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SLC16A1P53985 500 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RPP38P78345 283 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 ADAM17P78536 824 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 EMX1Q04741 257 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 SRSF11Q05519 484 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 C2orf80Q0P641 193 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SMARCB1Q12824 385 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SLC14A2Q15849 920 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DUOXA1Q1HG43 343 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 GALNT7Q86SF2 657 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 BBS7Q8IWZ6 715 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RAVER1Q8IY67 606 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 GPR65Q8IYL9 337 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 LGI4Q8N135 537 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TEX26Q8N6G2 289 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RPL3LQ92901 407 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 APIPQ96GX9 242 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 OSGEPL1Q9H4B0 414 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 PRDM8Q9NQV8 689 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 HEBP1Q9NRV9 189 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 RHCGQ9UBD6 479 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZNF840PA6NDX5 716 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 OR7A17O14581 309 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 AXIN1O15169 862 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ACOX3O15254 700 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 IDH3BO43837 385 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 PEX11BO96011 259 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 FUCA1P04066 466 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CCDC159P0C7I6 412 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TACR1P25103 407 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 KDELR2P33947 212 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 COPZ1P61923 177 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 NCF4Q15080 339 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TCEA2Q15560 299 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 PLEKHG6Q3KR16 790 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ATG9BQ674R7 924 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 NOXRED1Q6NXP6 359 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TRIM40Q6P9F5 258 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 Q6ZNX1 250 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DNAJB7Q7Z6W7 309 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 ALDH16A1Q8IZ83 802 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CAMKK1Q8N5S9 505 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 LKAAEAR1Q8TD35 194 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ATL1Q8WXF7 558 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms