RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
NCL-202ENST00000356936 MLIPQ5VWP3 458 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 FAM45BPQ6NSW5 357 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 SUSD1Q6UWL2 747 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 TTLL10Q6ZVT0 673 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 RNF44Q7L0R7 432 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 PRICKLE2Q7Z3G6 844 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 RAB43Q86YS6 212 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 ANKMY2Q8IV38 441 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
NCL-202ENST00000356936 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 FAM45AQ8TCE6 357 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 ZNF480Q8WV37 535 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 EEF1AKMT1Q8WVE0 214 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 CCDC138Q96M89 665 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 ZNF285Q96NJ3 590 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 IP6K3Q96PC2 410 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 ZFYVE21Q9BQ24 234 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 PLCD4Q9BRC7 762 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.23
NCL-202ENST00000356936 PARVBQ9HBI1 364 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 CUTCQ9NTM9 273 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 NSMCE4AQ9NXX6 385 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 VWA7Q9Y334 891 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
NCL-202ENST00000356936 KALRNO60229 2985 aa16.46■□□□□ 0.23
NCL-202ENST00000356936 FITM1A5D6W6 292 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 DSCR3O14972 297 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 SLC28A2O43868 658 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 HIST1H2AGP0C0S8 130 aaPredicted RBP16.45■□□□□ 0.22
NCL-202ENST00000356936 HIST1H2ADP20671 130 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 FOLR3P41439 243 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 GCGRP47871 477 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 CDKN2DP55273 166 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 VSX2P58304 361 aaPredicted RBP16.45■□□□□ 0.22
NCL-202ENST00000356936 RELAQ04206 551 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 SSPNQ14714 243 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 LACTB2Q53H82 288 aaPredicted RBP16.45■□□□□ 0.22
NCL-202ENST00000356936 RBM20Q5T481 1227 aaKnown RBP16.45■□□□□ 0.22
NCL-202ENST00000356936 THEMIS2Q5TEJ8 643 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 HECTD2Q5U5R9 776 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 ICE2Q659A1 982 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
NCL-202ENST00000356936 PAQR3Q6TCH7 311 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 SLC26A11Q86WA9 606 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 ZBED8Q8IZ13 594 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 ADAMTS17Q8TE56 1095 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 FKBP10Q96AY3 582 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 HIST1H2AHQ96KK5 128 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 HIST1H2AJQ99878 128 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 H2AFJQ9BTM1 129 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 PCBD2Q9H0N5 130 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 RAB17Q9H0T7 212 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 ACSS2Q9NR19 701 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 TAC3Q9UHF0 121 aa16.45■□□□□ 0.22
NCL-202ENST00000356936 A0A0J9YVX5 310 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 J3QKU1 62 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 EIF3HO15372 352 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCL-202ENST00000356936 RAD51CO43502 376 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 KLF7O75840 302 aaPredicted RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 IGHEP01854 428 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 EZRP15311 586 aaKnown RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 HRH2P25021 359 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 RRADP55042 308 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 TIAL1Q01085 375 aaKnown RBP eCLIP16.44■□□□□ 0.22
NCL-202ENST00000356936 CAV1Q03135 178 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 WASHC2DQ5SRD0 308 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 TCTN3Q6NUS6 607 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 ATG14Q6ZNE5 492 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 MED25Q71SY5 747 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 TMEM102Q8N9M5 508 aaPredicted RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 PPFIBP2Q8ND30 876 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 OR2Y1Q8NGV0 311 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 PYROXD1Q8WU10 500 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 LINGO1Q96FE5 620 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 TRIM54Q9BYV2 358 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 ING2Q9H160 280 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 DPH5Q9H2P9 285 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 SLC6A20Q9NP91 592 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 CCDC177Q9NQR7 707 aaPredicted RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 MOCS1Q9NZB8 636 aa16.44■□□□□ 0.22
NCL-202ENST00000356936 G3BP2Q9UN86 482 aaKnown RBP16.44■□□□□ 0.22
NCL-202ENST00000356936 HYKKA2RU49 373 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 ARGFXA6NJG6 315 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 SUV39H1O43463 412 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 ONECUT2O95948 504 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 ALBP02768 609 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 FDXRP22570 491 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 CCND1P24385 295 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 IMPA1P29218 277 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 EMP3P54852 163 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 NFKB2Q00653 900 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 FASTKD3Q14CZ7 662 aaKnown RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 DUPD1Q68J44 220 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 FRMPD2BQ6IN97 320 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 MRPL14Q6P1L8 145 aaKnown RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 PRMT9Q6P2P2 845 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 FBXO42Q6P3S6 717 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms