RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MAN2B1O00754 1011 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PGLSO95336 258 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SRCP12931 536 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 NFKB2Q00653 900 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TYSND1Q2T9J0 566 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 KCTD21Q4G0X4 260 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RALGPS1Q5JS13 557 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RNF220Q5VTB9 566 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GLYATQ6IB77 296 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GDPD4Q6W3E5 623 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MCFD2Q8NI22 146 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PPM1MQ96MI6 270 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 NELFAQ9H3P2 528 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ASB6Q9NWX5 421 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 FBXL12Q9NXK8 326 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 P2RX2Q9UBL9 471 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ATP6AP2A0A1C7CYW4 349 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF670-ZNF695F2Z2N8 137 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CCRL2O00421 344 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ALOX15BO15296 676 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ATP6AP2O75787 350 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PRDX6P30041 224 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ICAM3P32942 547 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TAS2R40P59535 323 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SCN1BQ07699 218 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ST3GAL4Q11206 333 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TATDN1Q6P1N9 297 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CERS5Q8N5B7 392 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 DNAAF1Q8NEP3 725 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZDHHC12Q96GR4 267 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CEP295NLQ96MC4 621 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SYT17Q9BSW7 474 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CADM1Q9BY67 442 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ABCB9Q9NP78 766 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MAFBQ9Y5Q3 323 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TRIM64BA6NI03 449 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 FHP07954 510 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 HCKP08631 526 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GJA1P17302 382 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SYN1P17600 705 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ITIH1P19827 911 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 BTN3A2P78410 334 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 LSAMPQ13449 338 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PERM1Q5SV97 790 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF676Q8N7Q3 588 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MFSD2AQ8NA29 543 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 DENND6BQ8NEG7 585 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TMEM68Q96MH6 324 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 OSBPL2Q9H1P3 480 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ADAP2Q9NPF8 381 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 GPR34Q9UPC5 381 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 A8MU76 341 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 UPK3BL1B0FP48 263 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 UPK3BL2E5RIL1 263 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CDC7O00311 574 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 IRF2P14316 349 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 MAPK3P27361 379 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CD47Q08722 323 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TARDBPQ13148 414 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ITPRIPL2Q3MIP1 535 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PLET1Q6UQ28 207 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 PARP8Q8N3A8 854 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 KLHDC7BQ96G42 594 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 TBC1D17Q9HA65 648 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ARL8BQ9NVJ2 186 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SMPD3Q9NY59 655 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 EIF2B4Q9UI10 523 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RPL36Q9Y3U8 105 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 EME2A4GXA9 379 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 A8MUI8 341 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CXCR6O00574 342 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CBSLP0DN79 551 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 CBSP35520 551 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 RPL6Q02878 288 aaKnown RBP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 SLBPQ14493 270 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-202ENST00000356435 AADACL2Q6P093 401 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 AHSA2Q719I0 299 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 OR6N1Q8NGY5 312 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 LPGAT1Q92604 370 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ORAI3Q9BRQ5 295 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 UCK2Q9BZX2 261 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ALG2Q9H553 416 aa5.41□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF878C9JN71 531 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ACOT7O00154 380 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 DUX1O43812 170 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 AHSA1O95433 338 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF806P0C7X5 589 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 CLCN4P51793 760 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GALK2Q01415 458 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 C1orf189Q5VU69 101 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 MLIPQ5VWP3 458 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 SSX6Q7RTT6 188 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 IQCHQ86VS3 1027 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 GHDCQ8N2G8 530 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 ZNF611Q8N823 705 aa5.4□□□□□ -1.54
PTPRD-202ENST00000356435 C10orf82Q8WW14 230 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms