RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CACHD1Q5VU97 1274 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 OR4F3Q6IEY1 312 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 DSG4Q86SJ6 1040 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 FIG4Q92562 907 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 HIC2Q96JB3 615 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 GPATCH1Q9BRR8 931 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 ZNF576Q9H609 170 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 PLXNA2O75051 1894 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 A0A0G2JN53 185 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 NPC1O15118 1278 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 ABCB1P08183 1280 aaPredicted RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 MPC1LP0DKB6 136 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 CLCNKAP51800 687 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 CDK3Q00526 305 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 ROR2Q01974 943 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 SKIV2LQ15477 1246 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 RAB30Q15771 203 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 MAPKAPK3Q16644 382 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 CYP51A1Q16850 503 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 PNCKQ6P2M8 343 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 AAGABQ6PD74 315 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 XKR5Q6UX68 686 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 KIAA1324Q6UXG2 1013 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 VPS35Q96QK1 796 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 MACROD1Q9BQ69 325 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 OR51B5Q9H339 312 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 PFDN4Q9NQP4 134 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 IMP3Q9NV31 184 aaKnown RBP17.07■□□□□ 0.32
NPAS3-202ENST00000356141 TRPS1Q9UHF7 1281 aa17.07■□□□□ 0.32
NPAS3-202ENST00000356141 A0A1W2PQU0 124 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SOBPA7XYQ1 873 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 ADAM15Q13444 863 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 HKDC1Q2TB90 917 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PDCD4Q53EL6 469 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 LRRC70Q7Z2Q7 622 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 EME1Q96AY2 570 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 S1PR5Q9H228 398 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PPT2Q9UMR5 302 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SNX6Q9UNH7 406 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 WDR37Q9Y2I8 494 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 NARSO43776 548 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 CPSF4O95639 269 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SDC1P18827 310 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 RPS13P62277 151 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PPP2CBP62714 309 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PPP2CAP67775 309 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 GDF15Q99988 308 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 GPSM3Q9Y4H4 160 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PCDHA9Q9Y5H5 950 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 DGKBQ9Y6T7 804 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 KCNE1BA0A087WTH5 132 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 FEZF1A0PJY2 475 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SLC28A1O00337 649 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 RNASEH1O60930 286 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 AP2A2O94973 939 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 PGRP06401 933 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 MYCLP1P12525 358 aaPredicted RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 HOXB2P14652 356 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 RPS14P62263 151 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 TBCELQ5QJ74 424 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 TMEM154Q6P9G4 183 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 C11orf96Q7Z7L8 435 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 C1orf52Q8N6N3 182 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 USP7Q93009 1102 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 ROPN1LQ96C74 230 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 CNBD2Q96M20 576 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 ZBTB18Q99592 522 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 SUCOQ9UBS9 1254 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 RIMS3Q9UJD0 308 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
NPAS3-202ENST00000356141 KLHL20Q9Y2M5 609 aa17.06■□□□□ 0.32
NPAS3-202ENST00000356141 KPNA5O15131 536 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 ADAM23O75077 832 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 EEDO75530 441 aaKnown RBP17.05■□□□□ 0.32
NPAS3-202ENST00000356141 PAPLNO95428 1278 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 SERPIND1P05546 499 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 USP39Q53GS9 565 aaKnown RBP17.05■□□□□ 0.32
NPAS3-202ENST00000356141 C8orf82Q6P1X6 216 aaPredicted RBP17.05■□□□□ 0.32
NPAS3-202ENST00000356141 DLEU7Q6UYE1 221 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 CLECL1Q8IZS7 167 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 MMP21Q8N119 569 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 IL17RCQ8NAC3 791 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 HUS1BQ8NHY5 278 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 FBXO30Q8TB52 745 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 SLX1AQ9BQ83 275 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 IRF2BPLQ9H1B7 796 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 TICRRQ7Z2Z1 1910 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 BBIP1A8MTZ0 92 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 STAMBPO95630 424 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 KIR2DL1P43626 348 aaPredicted RBP17.05■□□□□ 0.32
NPAS3-202ENST00000356141 HNMTP50135 292 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 ADGRE1Q14246 886 aa17.05■□□□□ 0.32
NPAS3-202ENST00000356141 SLBPQ14493 270 aaKnown RBP eCLIP17.05■□□□□ 0.32
NPAS3-202ENST00000356141 KIAA0040Q15053 153 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms