RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 ATP1A2P50993 1020 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 GFERP55789 205 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 GTF2H2Q13888 395 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 PDK4Q16654 411 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 CLPPQ16740 277 aaPredicted RBP23.37■■□□□ 1.33
HMGA2-201ENST00000354636 SLC5A12Q1EHB4 618 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 IRGCQ6NXR0 463 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 GTF2H2CQ6P1K8 395 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 GOLGA7Q7Z5G4 137 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 CCNYL1Q8N7R7 359 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 ZDHHC12Q96GR4 267 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 NUDT22Q9BRQ3 303 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 GSTO2Q9H4Y5 243 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 ATXN7L1Q9ULK2 861 aaPredicted RBP23.37■■□□□ 1.33
HMGA2-201ENST00000354636 SH2B3Q9UQQ2 575 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 PCNX2A6NKB5 2137 aa23.37■■□□□ 1.33
HMGA2-201ENST00000354636 MN1Q10571 1320 aaPredicted RBP23.36■■□□□ 1.33
HMGA2-201ENST00000354636 FKBP9O95302 570 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 HOXB3P14651 431 aaPredicted RBP23.36■■□□□ 1.33
HMGA2-201ENST00000354636 PIK3CGP48736 1102 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 CDH13P55290 713 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 NAA20P61599 178 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 RSPO4Q2I0M5 234 aaPredicted RBP23.36■■□□□ 1.33
HMGA2-201ENST00000354636 TMEM71Q6P5X7 295 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 ZCCHC23Q6ZST2 131 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 FAM20CQ8IXL6 584 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 SNX31Q8N9S9 440 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 PPP4R1Q8TF05 950 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 NEIL2Q969S2 332 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 PPM1MQ96MI6 270 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 TGM7Q96PF1 710 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 CD180Q99467 661 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 CAPS2Q9BXY5 557 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 GPRC5BQ9NZH0 403 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 ANGPTL3Q9Y5C1 460 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 UNC13CQ8NB66 2214 aa23.36■■□□□ 1.33
HMGA2-201ENST00000354636 RFPL3O75679 317 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 CCNDBP1O95273 360 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 CMPK1P30085 196 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 PLA2G5P39877 138 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 LSSP48449 732 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 ABATP80404 500 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 CLCQ05315 142 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 CHI3L2Q15782 390 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 KIAA1614Q5VZ46 1190 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 TMPRSS9Q7Z410 1059 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 C17orf64Q86WR6 236 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 WDR48Q8TAF3 677 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 FAM76AQ8TAV0 307 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 DPYSL5Q9BPU6 564 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 TMEM9Q9P0T7 183 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 DYRK1BQ9Y463 629 aa23.35■■□□□ 1.33
HMGA2-201ENST00000354636 SPAARA0A1B0GVQ0 90 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 KATNA1O75449 491 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 GNAZP19086 355 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 BGNP21810 368 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 NOVA1P51513 510 aaKnown RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 E2F1Q01094 437 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 PCDH1Q08174 1060 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 CFAP157Q5JU67 520 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 ZNF574Q6ZN55 896 aaPredicted RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 FRMD7Q6ZUT3 714 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 TRIM73Q86UV7 250 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 SLC5A11Q8WWX8 675 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 GFM1Q96RP9 751 aaKnown RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 MAP3K3Q99759 626 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 NOL11Q9H8H0 719 aaKnown RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 IPPKQ9H8X2 491 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 MRPS30Q9NP92 439 aaKnown RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 SEMA4BQ9NPR2 832 aaPredicted RBP23.34■■□□□ 1.33
HMGA2-201ENST00000354636 C1GALT1Q9NS00 363 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 PDP2Q9P2J9 529 aa23.34■■□□□ 1.33
HMGA2-201ENST00000354636 IGKV1-8A0A0C4DH67 115 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 A0A0J9YY10 115 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 E7EQ34 232 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 OR7A17O14581 309 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 H2AFYO75367 372 aaKnown RBP23.33■■□□□ 1.33
HMGA2-201ENST00000354636 NEFHP12036 1026 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 CEACAM1P13688 526 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 TSPAN8P19075 237 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 SDHBP21912 280 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 SIM1P81133 766 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-201ENST00000354636 CES4AQ5XG92 561 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 FAM92BQ6ZTR7 304 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 ABHD11Q8NFV4 315 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 OR4D9Q8NGE8 314 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 CNDP1Q96KN2 507 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 SLC6A20Q9NP91 592 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 CUEDC1Q9NWM3 386 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-201ENST00000354636 KLHL3Q9UH77 587 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 KLK4Q9Y5K2 254 aa23.33■■□□□ 1.33
HMGA2-201ENST00000354636 CFAP54Q96N23 3096 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 TLCD2A6NGC4 264 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 PPP6CO00743 305 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 KIF1CO43896 1103 aaKnown RBP23.33■■□□□ 1.32
HMGA2-201ENST00000354636 NPHS1O60500 1241 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 PRAMEF4O60810 478 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 SNRNP200O75643 2136 aaKnown RBP23.33■■□□□ 1.32
HMGA2-201ENST00000354636 SERPINE1P05121 402 aa23.33■■□□□ 1.32
HMGA2-201ENST00000354636 CDH3P22223 829 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms