RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SFTPA1Q8IWL2 248 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 CHERPQ8IWX8 916 aaKnown RBP16.18■□□□□ 0.18
SAMM50-201ENST00000350028 TMEM132CQ8N3T6 1108 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 OR52E4Q8NGH9 312 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 HM13Q8TCT9 377 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 FOXJ1Q92949 421 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 ZNF696Q9H7X3 374 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 FADS3Q9Y5Q0 445 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 ELOVL7A1L3X0 281 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 POP7O75817 140 aaKnown RBP16.17■□□□□ 0.18
SAMM50-201ENST00000350028 MYO1DO94832 1006 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SCELO95171 688 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 LDLRP01130 860 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 EPHX1P07099 455 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SOX11P35716 441 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 P2RY2P41231 377 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 RGS19P49795 217 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SRSF11Q05519 484 aaKnown RBP16.17■□□□□ 0.18
SAMM50-201ENST00000350028 PGS1Q32NB8 556 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 RNF220Q5VTB9 566 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 CAPN13Q6MZZ7 669 aaPredicted RBP16.17■□□□□ 0.18
SAMM50-201ENST00000350028 ZNF548Q8NEK5 533 aaPredicted RBP16.17■□□□□ 0.18
SAMM50-201ENST00000350028 OR9A1PQ8NGU1 263 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 OR10A6Q8NH74 314 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 POP5Q969H6 163 aaKnown RBP16.17■□□□□ 0.18
SAMM50-201ENST00000350028 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 CENPKQ9BS16 269 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 UGT2B28Q9BY64 529 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 DPEP2Q9H4A9 486 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SGK2Q9HBY8 427 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SERHLQ9NQF3 203 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 PPT2Q9UMR5 302 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 MAPRE3Q9UPY8 281 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 SZT2Q5T011 3432 aa16.17■□□□□ 0.18
SAMM50-201ENST00000350028 ARHGAP10A1A4S6 786 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 FAM149AA5PLN7 773 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 MGAT4DA6NG13 374 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 KAT7O95251 611 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 TRPC1P48995 793 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 C21orf58P58505 322 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 MTAPQ13126 283 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 FAM98BQ52LJ0 330 aaKnown RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 NAIF1Q69YI7 327 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ADAMTSL4Q6UY14 1074 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 NUDT18Q6ZVK8 323 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 SYT12Q8IV01 421 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 MICU2Q8IYU8 434 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CBR4Q8N4T8 237 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 PHC3Q8NDX5 983 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ST13P5Q8NFI4 369 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 OR2L2Q8NH16 312 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ZNF480Q8WV37 535 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 STARD8Q92502 1023 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 REPS1Q96D71 796 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 RNF145Q96MT1 663 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 SEPHS2Q99611 448 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CPPED1Q9BRF8 314 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 BDH2Q9BUT1 245 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CHID1Q9BWS9 393 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 IGFLR1Q9H665 355 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 INVSQ9Y283 1065 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 PCDHB14Q9Y5E9 798 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 COL4A3Q01955 1670 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 RNF103-CHMP3A0A140T963 221 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 FAM220BPB1ANY3 271 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 RASAL1O95294 804 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 RAP2AP10114 183 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ZNF8P17098 575 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 HOXB9P17482 250 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 GRIA2P42262 883 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 MYBPC1Q00872 1141 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CHRNB3Q05901 458 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ACSM2AQ08AH3 577 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CNTN1Q12860 1018 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 NHSL2Q5HYW2 709 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 C10orf62Q5T681 223 aaPredicted RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ACSM2BQ68CK6 577 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 SLCO4C1Q6ZQN7 724 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 FKBP9P1Q75LS8 142 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 TRMT11Q7Z4G4 463 aaKnown RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CARM1Q86X55 608 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 CALHM3Q86XJ0 350 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 EPHX4Q8IUS5 362 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ZNF547Q8IVP9 402 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 SYTL1Q8IYJ3 562 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 NELL1Q92832 810 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 WDR34Q96EX3 536 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 KAT8Q9H7Z6 458 aaKnown RBP16.16■□□□□ 0.18
SAMM50-201ENST00000350028 HCN2Q9UL51 889 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 DYRK1BQ9Y463 629 aa16.16■□□□□ 0.18
SAMM50-201ENST00000350028 ACOX3O15254 700 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 APODP05090 189 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 SMIM18P0DKX4 95 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 KIR3DL1P43629 444 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 DDX39BQ13838 428 aaKnown RBP16.15■□□□□ 0.18
SAMM50-201ENST00000350028 GTDC1Q4AE62 458 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 LIN52Q52LA3 116 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 PIP5KL1Q5T9C9 394 aa16.15■□□□□ 0.18
SAMM50-201ENST00000350028 EGFLAMQ63HQ2 1017 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms