RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 IL1RL1Q01638 556 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PCSK7Q16549 785 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TIMM50Q3ZCQ8 353 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SOWAHCQ53LP3 525 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MSANTD2Q6P1R3 559 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SCIMPQ6UWF3 145 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 KCTD20Q7Z5Y7 419 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 RNF130Q86XS8 419 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 DNAJC22Q8N4W6 341 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 NKAPQ8N5F7 415 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM181AQ8N9Y4 354 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 OR56A4Q8NGH8 313 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ASB15Q8WXK1 588 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 REPS1Q96D71 796 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CRELD1Q96HD1 420 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 HRASLS5Q96KN8 279 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 COL21A1Q96P44 957 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CHCHD6Q9BRQ6 235 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 C1QTNF7Q9BXJ2 289 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SRRQ9GZT4 340 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ATXN3LQ9H3M9 355 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 RASSF1Q9NS23 344 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 OLA1Q9NTK5 396 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TMEM248Q9NWD8 314 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MAT2BQ9NZL9 334 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MARCH4Q9P2E8 410 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TRMT6Q9UJA5 497 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PCTPQ9UKL6 214 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TMPRSS11EQ9UL52 423 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 RNF112Q9ULX5 631 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 A0A096LPI6 279 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CLCA1A8K7I4 914 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ATXN1LP0C7T5 689 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PSKH1P11801 424 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PSMA3P25788 255 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 C21orf33P30042 268 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 AKT1P31749 480 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CSTF2P33240 577 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PBX3P40426 434 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC19A1P41440 591 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 GZMMP51124 257 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ARSDP51689 593 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 STC1P52823 247 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TEKQ02763 1124 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SCN1BQ07699 218 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 NPRL3Q12980 569 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 IKZF1Q13422 519 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF79Q15937 498 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 BAK1Q16611 211 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SIRPB2Q5JXA9 342 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 RAP1GAP2Q684P5 730 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 FAHD1Q6P587 224 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 GPRIN3Q6ZVF9 776 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 LDB1Q86U70 411 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MSRB3Q8IXL7 192 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 GLB1L3Q8NCI6 653 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 LRRC20Q8TCA0 184 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 BRSK1Q8TDC3 778 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 UBE2FQ969M7 185 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TMEM80Q96HE8 168 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 FRMD6Q96NE9 622 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 KCNS3Q9BQ31 491 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 C17orf62Q9BQA9 187 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 ACAT2Q9BWD1 397 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 GTPBP2Q9BX10 602 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 UCK2Q9BZX2 261 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MMP28Q9H239 520 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 RNF121Q9H920 327 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 NT5MQ9NPB1 228 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PRDM8Q9NQV8 689 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 KRT84Q9NSB2 600 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 CATSPERZQ9NTU4 200 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 C1orf109Q9NX04 203 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TAS2R13Q9NYV9 303 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 GLTPQ9NZD2 209 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 MUTYHQ9UIF7 546 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 POLHQ9Y253 713 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 HS3ST4Q9Y661 456 aa10.05□□□□□ -0.8
CHRNA1-202ENST00000348749 TRBV5-3A0A0A0MS03 114 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 A0A0B4J293 547 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 A0A1W2PQ09 198 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 B4DXG7 233 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 MEN1O00255 615 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 TFECO14948 347 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ECI2O75521 394 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms