RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DFNA5O60443 496 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 INMTO95050 263 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TIMP1P01033 207 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SYN1P17600 705 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 PIK3R6Q5UE93 754 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 LRRC70Q7Z2Q7 622 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 RGL4Q8IZJ4 473 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 OR10G2Q8NGC3 310 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 CAPN10Q9HC96 672 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 AKAP7Q9P0M2 348 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 ZNF282Q9UDV7 671 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 ENTPD4Q9Y227 616 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 RNF11Q9Y3C5 154 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 IRGMA1A4Y4 181 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 SLC28A2O43868 658 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 OR1I1O60431 355 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 FGF4P08620 206 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 OXTRP30559 389 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 CYP4F8P98187 520 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 GNA13Q14344 377 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 TPRG1LQ5T0D9 272 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 LARP4Q71RC2 724 aaKnown RBP eCLIP14.38□□□□□ -0.11
NUP50-201ENST00000347635 MFSD2AQ8NA29 543 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 VANGL1Q8TAA9 524 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 CLEC4MQ9H2X3 399 aaPredicted RBP14.38□□□□□ -0.11
NUP50-201ENST00000347635 AMBNQ9NP70 447 aa14.38□□□□□ -0.11
NUP50-201ENST00000347635 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CYP7B1O75881 506 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 KCNQ1P51787 676 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 SCN1BQ07699 218 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 C2orf80Q0P641 193 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GRSF1Q12849 480 aaKnown RBP eCLIP14.37□□□□□ -0.11
NUP50-201ENST00000347635 GPR33Q49SQ1 333 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 TMPRSS11AQ6ZMR5 421 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 LSMEM2Q8N112 164 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GAB3Q8WWW8 586 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ISL2Q96A47 359 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 PTERQ96BW5 349 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 HERC2P3Q9BVR0 1158 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CD244Q9BZW8 370 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 TREX1Q9NSU2 369 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CD84Q9UIB8 345 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GJD2Q9UKL4 321 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 SNX7Q9UNH6 387 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 A0A1W2PRU2 124 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 C7orf72A4D263 438 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 LSM1O15116 133 aaKnown RBP14.37□□□□□ -0.11
NUP50-201ENST00000347635 AP2A2O94973 939 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 C9P02748 559 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GGT1P19440 569 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 MANFP55145 182 aaKnown RBP14.37□□□□□ -0.11
NUP50-201ENST00000347635 KIAA1614Q5VZ46 1190 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 MED27Q6P2C8 311 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GPR65Q8IYL9 337 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CLIP4Q8N3C7 705 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 TMED5Q9Y3A6 229 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ATG13O75143 517 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GADD45GO95257 159 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 FEN1P39748 380 aaKnown RBP14.37□□□□□ -0.11
NUP50-201ENST00000347635 RFX3P48380 749 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 SLC15A4Q8N697 577 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ING5Q8WYH8 240 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 TMEM125Q96AQ2 219 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 HSH2DQ96JZ2 352 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 FZD4Q9ULV1 537 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 GNAO1P09471 354 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CSF2RAP15509 400 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 PTSQ03393 145 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ZNF404Q494X3 552 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ATG9BQ674R7 924 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 CXorf40BQ96DE9 158 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 C1GALT1C1Q96EU7 318 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 DIRAS2Q96HU8 199 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 FUNDC2Q9BWH2 189 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 C11orf16Q9NQ32 467 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 ING3Q9NXR8 418 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
NUP50-201ENST00000347635 AGRPO00253 132 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 EPHX1P07099 455 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 AZGP1P25311 298 aaKnown RBP14.36□□□□□ -0.11
NUP50-201ENST00000347635 HNF4AP41235 474 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 HNMTP50135 292 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 LAPTM4AQ15012 233 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 FBXO43Q4G163 708 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 ADGRG5Q8IZF4 528 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 POF1BQ8WVV4 589 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 USP7Q93009 1102 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 MRPL48Q96GC5 212 aaKnown RBP14.36□□□□□ -0.11
NUP50-201ENST00000347635 CRELD1Q96HD1 420 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 LHPPQ9H008 270 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 THUMPD1Q9NXG2 353 aaKnown RBP14.36□□□□□ -0.11
NUP50-201ENST00000347635 LYVE1Q9Y5Y7 322 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 DIRAS1O95057 198 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 KCNA5P22460 613 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 PTPN5P54829 565 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms