RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CHCHD4Q8N4Q1 142 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 PROKR2Q8NFJ6 384 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 LY6KQ17RY6 165 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 RALGPS1Q5JS13 557 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 SLC22A10Q63ZE4 541 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 EXOSC8Q96B26 276 aaKnown RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 FCRL2Q96LA5 508 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 ZSCAN5AQ9BUG6 496 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TFB2MQ9H5Q4 396 aaKnown RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 RCCD1A6NED2 376 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 BNIP3Q12983 259 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TBRG1Q3YBR2 411 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CYP2S1Q96SQ9 504 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 ITM2CQ9NQX7 267 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CCR8P51685 355 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TLE3Q04726 772 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 MSANTD2Q6P1R3 559 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TMCO2Q7Z6W1 182 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 MFSD8Q8NHS3 518 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TIMM13Q9Y5L4 95 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 GLUD2P49448 558 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 C9orf57Q5W0N0 161 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 SCGB1C1Q8TD33 95 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CPXM1Q96SM3 734 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 SMURF1Q9HCE7 757 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 MAP10Q9P2G4 905 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 ERVW-1Q9UQF0 538 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 TRIM64A6NGJ6 449 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 PRKYO43930 277 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 SPTBP11277 2137 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 RPL10P27635 214 aaKnown RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CYCSP99999 105 aaKnown RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 HSPB3Q12988 150 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 KIAA0930Q6ICG6 404 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-201ENST00000345617 ABHD13Q7L211 337 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 CYP2W1Q8TAV3 490 aa18.94■□□□□ 0.62
HDAC4-201ENST00000345617 UBE2Q2LH0YL09 131 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 PIP5K1BO14986 540 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CREBL2O60519 120 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-201ENST00000345617 NLGN3Q9NZ94 848 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 OR6C75A6NL08 312 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CAPN14A8MX76 684 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 DUSP4Q13115 394 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 KANK2Q63ZY3 851 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ANKRD46Q86W74 232 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 HSPBAP1Q96EW2 488 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ADH1AP07327 375 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ERCC1P07992 297 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CD40LGP29965 261 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ACER1Q8TDN7 264 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 GPR21Q99679 349 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CFAP97Q9P2B7 532 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 AGAP5A6NIR3 686 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 HDCP19113 662 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CDK2P24941 298 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 SLC36A4Q6YBV0 504 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF705EA8MWA4 302 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-201ENST00000345617 SOX10P56693 466 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ACTC1P68032 377 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ACTA1P68133 377 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 GPRC6AQ5T6X5 926 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 ERMP1Q7Z2K6 904 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 WACQ9BTA9 647 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 BMP6P22004 513 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 MASP1P48740 699 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 NFKB2Q00653 900 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 NAE1Q13564 534 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 NKAPLQ5M9Q1 402 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CELF3Q5SZQ8 465 aaKnown RBP18.93■□□□□ 0.62
HDAC4-201ENST00000345617 PCDHB18PQ96TA0 734 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 CD180Q99467 661 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 SALL3Q9BXA9 1300 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 A8MX80 341 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 MAFO75444 373 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-201ENST00000345617 RHOQP17081 205 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 C3P1Q6ZMU1 363 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 PNPLA2Q96AD5 504 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 PREBQ9HCU5 417 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 RIMKLBQ9ULI2 386 aa18.93■□□□□ 0.62
HDAC4-201ENST00000345617 RPS3P23396 243 aaKnown RBP eCLIP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 DLSTP36957 453 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 ARSKQ6UWY0 536 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 KATNBL1Q9H079 304 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 FAM105AQ9NUU6 356 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 ABRAXAS2Q15018 415 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 EXOSC1Q9Y3B2 195 aaKnown RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 PSMD10O75832 226 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 PSMA6P60900 246 aaKnown RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 MOXD2PA6NHM9 499 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 C1orf196B1AJZ1 125 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 BTBD19C9JJ37 291 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 RPS14P62263 151 aaKnown RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 UBE2J2Q8N2K1 259 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 GOLM1Q8NBJ4 401 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 SLA2Q9H6Q3 261 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 CNTN3Q9P232 1028 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 ZNF701M0R085 212 aaPredicted RBP18.92■□□□□ 0.62
HDAC4-201ENST00000345617 CES5AQ6NT32 575 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 SLC29A3Q9BZD2 475 aa18.92■□□□□ 0.62
HDAC4-201ENST00000345617 ATG12O94817 140 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms