RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 PHC1P78364 1004 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 DMPKQ09013 629 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 E2F2Q14209 437 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 GRHL2Q6ISB3 625 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 CHCHD4Q8N4Q1 142 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 DNAJB14Q8TBM8 379 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 RAD51AP1Q96B01 352 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 APOLD1Q96LR9 279 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 EBPLQ9BY08 206 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 LMAN1LQ9HAT1 526 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
CDC42-202ENST00000344548 CMTM6Q9NX76 183 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 USP36Q9P275 1121 aaKnown RBP13.12□□□□□ -0.31
CDC42-202ENST00000344548 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 CD300AQ9UGN4 299 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 CYP8B1Q9UNU6 501 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 NEUROG3Q9Y4Z2 214 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
CDC42-202ENST00000344548 A0A1W2PPV9 198 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 PRSS38A1L453 326 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 FAM234BA2RU67 622 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 CCDC154A6NI56 674 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 IGHV4-34P06331 123 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SDC1P18827 310 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 CASP2P42575 452 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 MAPK9P45984 424 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 PCDH1Q08174 1060 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 GALNT13Q8IUC8 556 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 DCUN1D3Q8IWE4 304 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SLC15A3Q8IY34 581 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 OR2T34Q8NGX1 318 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 HUS1BQ8NHY5 278 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 LRRC58Q96CX6 371 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SCARF2Q96GP6 870 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 TSSK3Q96PN8 268 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 HHIPQ96QV1 700 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 USP22Q9UPT9 525 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 H0YIV9 168 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 CACNB4O00305 520 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 UGDHO60701 494 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 AMD1P17707 334 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 SPANXN4Q5MJ08 99 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 FAM20CQ8IXL6 584 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 TMEM74Q96NL1 305 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 C1QTNF7Q9BXJ2 289 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 CUEDC1Q9NWM3 386 aaPredicted RBP13.11□□□□□ -0.31
CDC42-202ENST00000344548 LAMA1P25391 3075 aa13.11□□□□□ -0.31
CDC42-202ENST00000344548 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 EEDO75530 441 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 LRATO95237 230 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SEMA4FO95754 770 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ERGP11308 486 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 PCNAP12004 261 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 FOSL2P15408 326 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ME2P23368 584 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 JAK1P23458 1154 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 SLBPQ14493 270 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDC42-202ENST00000344548 FAM174BQ3ZCQ3 159 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 THEMIS2Q5TEJ8 643 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 DLEU7Q6UYE1 221 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 HACD2Q6Y1H2 254 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ZNF852Q6ZMS4 543 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 MAGEC3Q8TD91 643 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ASB12Q8WXK4 309 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 C11orf24Q96F05 449 aaPredicted RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 FERD3LQ96RJ6 166 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 TBC1D29Q9UFV1 150 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 TAC3Q9UHF0 121 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 EIF3LQ9Y262 564 aaKnown RBP13.1□□□□□ -0.31
CDC42-202ENST00000344548 CROCCQ5TZA2 2017 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 H3BNX3 289 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 ANP32DO95626 131 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 C1GALT1C1LP0DN25 315 aa13.1□□□□□ -0.31
CDC42-202ENST00000344548 CDH1P12830 882 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms