RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 LAMA1P25391 3075 aa15.78■□□□□ 0.12
CEACAM1-202ENST00000344391 HEATR5BQ9P2D3 2071 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ATP6AP2A0A1C7CYW4 349 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ERICH4A6NGS2 130 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 B4DGG1 531 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 MANBAO00462 879 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 FCHO1O14526 889 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 PRICKLE3O43900 615 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 CCDC22O60826 627 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ULK1O75385 1050 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ATP6AP2O75787 350 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 KRT6AP02538 564 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 KRT6BP04259 564 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 SERPINA6P08185 405 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 C1GALT1C1LP0DN25 315 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 VARSP26640 1264 aaKnown RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 RXRGP48443 463 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 KRT6CP48668 564 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 SIM2Q14190 667 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 GPR18Q14330 331 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ABRAXAS2Q15018 415 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ZRSR2Q15696 482 aaKnown RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 CATSPEREQ5SY80 951 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ATG9BQ674R7 924 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 NXNQ6DKJ4 435 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 GRHL2Q6ISB3 625 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 IL27RAQ6UWB1 636 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 SCIMPQ6UWF3 145 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 NXPE4Q6UWF7 544 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 SLC9B2Q86UD5 537 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 OR4E2Q8NGC2 313 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 JPH3Q8WXH2 748 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 USP7Q93009 1102 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 PTCD3Q96EY7 689 aaKnown RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ELF4Q99607 663 aaPredicted RBP15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 ACAT2Q9BWD1 397 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 NMUR2Q9GZQ4 415 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 TWSG1Q9GZX9 223 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 UCKL1Q9NWZ5 548 aa15.77■□□□□ 0.12
CEACAM1-202ENST00000344391 SNRNP200O75643 2136 aaKnown RBP15.77■□□□□ 0.11
CEACAM1-202ENST00000344391 E9PBE3 544 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 KLHL41O60662 606 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SDC3O75056 442 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 PSMB5P28074 263 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 HOXD12P35452 270 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 YBX1P67809 324 aaKnown RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SPDYAQ5MJ70 313 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 Q6ZSR9 355 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 TMPRSS11BQ86T26 416 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 C17orf64Q86WR6 236 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 RBM12BQ8IXT5 1001 aaKnown RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 OR2A1Q8NGT9 310 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 CCT6BQ92526 530 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ERP27Q96DN0 273 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 EFCAB11Q9BUY7 163 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 AKTIPQ9H8T0 292 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 C11orf16Q9NQ32 467 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 FARSBQ9NSD9 589 aaKnown RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SNX6Q9UNH7 406 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 PCDHB11Q9Y5F2 797 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 FAM86C2PA6NEL3 165 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 H0YIV9 168 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 VPS4BO75351 444 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ANXA6P08133 673 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 PEBP1P30086 187 aaKnown RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 DPP6P42658 865 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 PRDX1Q06830 199 aaKnown RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 BNIP3Q12983 259 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SHBQ15464 509 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 DEFB133Q30KQ1 61 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ICE2Q659A1 982 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 OGFOD3Q6PK18 319 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 TRIM46Q7Z4K8 759 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 CLNKQ7Z7G1 428 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ADGRF3Q8IZF5 1079 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 OR2T11Q8NH01 316 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 TUBGCP3Q96CW5 907 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SRMSQ9H3Y6 488 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ELOVL6Q9H5J4 265 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SAR1AQ9NR31 198 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SPHK1Q9NYA1 384 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ZFP69BQ9UJL9 534 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 ZNF490Q9ULM2 529 aaPredicted RBP15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 TRIM33Q9UPN9 1127 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
CEACAM1-202ENST00000344391 SERTM1A2A2V5 107 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 BTN3A3O00478 584 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 NOBOXO60393 691 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 PDYNP01213 254 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 CHRM5P08912 532 aaPredicted RBP15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 PRR35P0CG20 571 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 CDH1P12830 882 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 NCF2P19878 526 aaPredicted RBP15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 ARRB1P49407 418 aaPredicted RBP15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 HHEXQ03014 270 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 DUOXA1Q1HG43 343 aa15.75■□□□□ 0.11
CEACAM1-202ENST00000344391 ZNF423Q2M1K9 1284 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms