RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 IRGCQ6NXR0 463 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 AGTRAPQ6RW13 159 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 USP53Q70EK8 1073 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 PRSS42Q7Z5A4 293 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 LSMEM2Q8N112 164 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 SPATA6LQ8N4H0 392 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 PDPRQ8NCN5 879 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 DENND1AQ8TEH3 1009 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 PTERQ96BW5 349 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 MED8Q96G25 268 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 NAF1Q96HR8 494 aaKnown RBP18.06■□□□□ 0.48
CDHR4-201ENST00000343366 SCYL1Q96KG9 808 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 GPR78Q96P69 363 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 ATOH8Q96SQ7 321 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 HAUS8Q9BT25 410 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 XKR8Q9H6D3 395 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 SSU72Q9NP77 194 aaKnown RBP18.06■□□□□ 0.48
CDHR4-201ENST00000343366 CCDC177Q9NQR7 707 aaPredicted RBP18.06■□□□□ 0.48
CDHR4-201ENST00000343366 CD274Q9NZQ7 290 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 SEMA5BQ9P283 1151 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 MID2Q9UJV3 735 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 PLAGL1Q9UM63 463 aa18.06■□□□□ 0.48
CDHR4-201ENST00000343366 ANKRD12Q6UB98 2062 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 A0A1W2PPM1 405 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 BTN3A3O00478 584 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 SMIM24O75264 130 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 WISP1O95388 367 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 GUCA1CO95843 209 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 THRAP10827 490 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 TAC1P20366 129 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 PRDX3P30048 256 aaKnown RBP18.05■□□□□ 0.48
CDHR4-201ENST00000343366 RPA3P35244 121 aaPredicted RBP18.05■□□□□ 0.48
CDHR4-201ENST00000343366 GGT5P36269 586 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 GABREP78334 506 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 ABATP80404 500 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 KCNC4Q03721 635 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 SRSF1Q07955 248 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDHR4-201ENST00000343366 VAC14Q08AM6 782 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 OR4D1Q15615 310 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 CCSMST1Q4G0I0 132 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 TECRLQ5HYJ1 363 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 SPESP1Q6UW49 350 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 SH2D5Q6ZV89 423 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 LINC01555Q8NAE3 123 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 RHBDF1Q96CC6 855 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 NUDT22Q9BRQ3 303 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 CAPS2Q9BXY5 557 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 DPH1Q9BZG8 443 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 ANKMY1Q9P2S6 941 aa18.05■□□□□ 0.48
CDHR4-201ENST00000343366 TNPO3Q9Y5L0 923 aaKnown RBP18.05■□□□□ 0.48
CDHR4-201ENST00000343366 CMPK1P30085 196 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 CSF2RBP32927 897 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 GLRBP48167 497 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 ALDH18A1P54886 795 aaKnown RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 BROXQ5VW32 411 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 ARHGAP22Q7Z5H3 698 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 SLITRK4Q8IW52 837 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 SRRM1Q8IYB3 904 aaKnown RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 PLD6Q8N2A8 252 aaKnown RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 GOLGA6L1Q8N7Z2 621 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 LMNTD1Q8N9Z9 388 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 OR56A3Q8NH54 315 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 KCNE4Q8WWG9 221 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 JPH3Q8WXH2 748 aaPredicted RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 ZUFSPQ96AP4 578 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 CCDC126Q96EE4 140 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 LIN37Q96GY3 246 aaPredicted RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 TGM7Q96PF1 710 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 PITPNM3Q9BZ71 974 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 CHRNA10Q9GZZ6 450 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 POLR1BQ9H9Y6 1135 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 IKZF3Q9UKT9 509 aa18.04■□□□□ 0.48
CDHR4-201ENST00000343366 ATXN7L1Q9ULK2 861 aaPredicted RBP18.04■□□□□ 0.48
CDHR4-201ENST00000343366 IGHV5-10-1A0A0J9YXX1 117 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 A0A0J9YY10 115 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 SUPT3HB4E1H0 165 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 TARM1B6A8C7 271 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 GOLGA8RI6L899 631 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 K7ENP7 123 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 MAP2K7O14733 419 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 PRICKLE3O43900 615 aaPredicted RBP18.03■□□□□ 0.48
CDHR4-201ENST00000343366 SUPT3HO75486 399 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 RASSF9O75901 435 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 ZBTB11O95625 1053 aaPredicted RBP18.03■□□□□ 0.48
CDHR4-201ENST00000343366 UGT2B7P16662 529 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 CDH3P22223 829 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 NAA20P61599 178 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 SF1Q15637 639 aaKnown RBP18.03■□□□□ 0.48
CDHR4-201ENST00000343366 ISXQ2M1V0 245 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 THEMIS2Q5TEJ8 643 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 CACHD1Q5VU97 1274 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 INO80CQ6PI98 192 aaPredicted RBP18.03■□□□□ 0.48
CDHR4-201ENST00000343366 LCTLQ6UWM7 567 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 KLHDC8AQ8IYD2 350 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 LRRC56Q8IYG6 542 aaPredicted RBP18.03■□□□□ 0.48
CDHR4-201ENST00000343366 RDH11Q8TC12 318 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 APOPT1Q96IL0 206 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 IL17FQ96PD4 163 aa18.03■□□□□ 0.48
CDHR4-201ENST00000343366 OR2A14Q96R47 310 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms