RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CDC14AQ9UNH5 594 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ITM2BQ9Y287 266 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ACTL7AQ9Y615 435 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CCDC182A6NF36 153 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CCNKO75909 580 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PRG2P13727 222 aa7□□□□□ -1.29
VCAN-202ENST00000342785 HNF1BP35680 557 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PSMD8P48556 350 aa7□□□□□ -1.29
VCAN-202ENST00000342785 INHBCP55103 352 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SKP1P63208 163 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CDK6Q00534 326 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MYBPC3Q14896 1274 aa7□□□□□ -1.29
VCAN-202ENST00000342785 QPRTQ15274 297 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MOGQ16653 247 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KCTD11Q693B1 232 aa7□□□□□ -1.29
VCAN-202ENST00000342785 DPY19L3Q6ZPD9 716 aa7□□□□□ -1.29
VCAN-202ENST00000342785 NEK10Q6ZWH5 1172 aa7□□□□□ -1.29
VCAN-202ENST00000342785 LAPTM4BQ86VI4 370 aa7□□□□□ -1.29
VCAN-202ENST00000342785 OR13J1Q8NGT2 312 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KCNN1Q92952 543 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ART5Q96L15 291 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF641Q96N77 438 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 COL21A1Q96P44 957 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ABCB9Q9NP78 766 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TVP23BQ9NYZ1 205 aa7□□□□□ -1.29
VCAN-202ENST00000342785 IL17CQ9P0M4 197 aa7□□□□□ -1.29
VCAN-202ENST00000342785 WBP11Q9Y2W2 641 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 TAF1P21675 1872 aa7□□□□□ -1.29
VCAN-202ENST00000342785 H0YAE9 185 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PITPNM1O00562 1244 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SOCS2O14508 198 aa7□□□□□ -1.29
VCAN-202ENST00000342785 EEDO75530 441 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 KDELR2P33947 212 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PREPP48147 710 aa7□□□□□ -1.29
VCAN-202ENST00000342785 HLCSP50747 726 aa7□□□□□ -1.29
VCAN-202ENST00000342785 IST1P53990 364 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MXD1Q05195 221 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TUBA3CQ13748 450 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TIGD6Q17RP2 521 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF513Q8N8E2 541 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 OR10G6Q8NH81 332 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF420Q8TAQ5 688 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 SLC9A6Q92581 669 aa7□□□□□ -1.29
VCAN-202ENST00000342785 DIRAS2Q96HU8 199 aa7□□□□□ -1.29
VCAN-202ENST00000342785 RDH12Q96NR8 316 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZSCAN5AQ9BUG6 496 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KCNH6Q9H252 994 aa7□□□□□ -1.29
VCAN-202ENST00000342785 DCSTAMPQ9H295 470 aa7□□□□□ -1.29
VCAN-202ENST00000342785 DUS2Q9NX74 493 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 SATB2Q9UPW6 733 aa7□□□□□ -1.29
VCAN-202ENST00000342785 F5P12259 2224 aa7□□□□□ -1.29
VCAN-202ENST00000342785 GSAPA4D1B5 854 aa7□□□□□ -1.29
VCAN-202ENST00000342785 URADA6NGE7 173 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZW10O43264 779 aa7□□□□□ -1.29
VCAN-202ENST00000342785 IDH3BO43837 385 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MPZL2O60487 215 aa7□□□□□ -1.29
VCAN-202ENST00000342785 POP7O75817 140 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 AP2A2O94973 939 aa7□□□□□ -1.29
VCAN-202ENST00000342785 INMTO95050 263 aa7□□□□□ -1.29
VCAN-202ENST00000342785 RASAL1O95294 804 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ACRP10323 421 aa7□□□□□ -1.29
VCAN-202ENST00000342785 C7P10643 843 aa7□□□□□ -1.29
VCAN-202ENST00000342785 LAMP2P13473 410 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KELP23276 732 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ELK4P28324 431 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CDKN1CP49918 316 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 DGKEP52429 567 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ERVPABLB-1P60509 514 aa7□□□□□ -1.29
VCAN-202ENST00000342785 RGS1Q08116 209 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MADCAM1Q13477 382 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SCARB2Q14108 478 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNHIT3Q15649 155 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 NOXRED1Q6NXP6 359 aa7□□□□□ -1.29
VCAN-202ENST00000342785 FAM131AQ6UXB0 335 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF730Q6ZMV8 503 aa7□□□□□ -1.29
VCAN-202ENST00000342785 AMZ2Q86W34 360 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF655Q8N720 491 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 RASSF5Q8WWW0 418 aa7□□□□□ -1.29
VCAN-202ENST00000342785 AP3S1Q92572 193 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CMTM7Q96FZ5 175 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MS4A4AQ96JQ5 239 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MYRFLQ96LU7 910 aa7□□□□□ -1.29
VCAN-202ENST00000342785 OR10H1Q9Y4A9 318 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TRBC2A0A5B9 178 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SOCS5O75159 536 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ATP6V1G1O75348 118 aa7□□□□□ -1.29
VCAN-202ENST00000342785 GBAP04062 536 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SOD2P04179 222 aa7□□□□□ -1.29
VCAN-202ENST00000342785 RPLP0P05388 317 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 PRDX3P30048 256 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 STK19P49842 368 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 TPTEP56180 551 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CDKL1Q00532 357 aa7□□□□□ -1.29
VCAN-202ENST00000342785 VMACQ2NL98 169 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PAGE3Q5JUK9 113 aa7□□□□□ -1.29
VCAN-202ENST00000342785 LY6G5CQ5SRR4 150 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KIAA0319Q5VV43 1072 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ALKAL1Q6UXT8 129 aa7□□□□□ -1.29
VCAN-202ENST00000342785 LARP4Q71RC2 724 aaKnown RBP eCLIP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms