RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FAM199XQ6PEV8 388 aaPredicted RBP14.78□□□□□ -0.04
VAPA-201ENST00000340541 FIGLAQ6QHK4 219 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 SUSD1Q6UWL2 747 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 C3orf62Q6ZUJ4 267 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PPFIBP2Q8ND30 876 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 KIF18AQ8NI77 898 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 STARD8Q92502 1023 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 ZUFSPQ96AP4 578 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 RUFY1Q96T51 708 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 RHOJQ9H4E5 214 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 ACTR5Q9H9F9 607 aaPredicted RBP14.78□□□□□ -0.04
VAPA-201ENST00000340541 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 SLC6A20Q9NP91 592 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PCMTD2Q9NV79 361 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.78□□□□□ -0.04
VAPA-201ENST00000340541 IKZF3Q9UKT9 509 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PLCL2Q9UPR0 1127 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PDE10AQ9Y233 779 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PCDHGA6Q9Y5G7 932 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 BSNQ9UPA5 3926 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 IGKV1-8A0A0C4DH67 115 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 FAM95CA0A1B0GW59 222 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 TARM1B6A8C7 271 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 E7EQ34 232 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 MEN1O00255 615 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 SLC16A5O15375 505 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 ZNF749O43361 778 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 OR2B3O76000 313 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 C8GP07360 202 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 CTAGE8P0CG41 777 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 ZNF37AP17032 561 aaPredicted RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 CYP2A7P20853 494 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 HSD17B2P37059 387 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 TAS2R39P59534 338 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 IL2P60568 153 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 SP140Q13342 867 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 PDAP1Q13442 181 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 DNASE1L3Q13609 305 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 PHKG1Q16816 387 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 CTAGE6Q86UF2 777 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 PTRH1Q86Y79 214 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 MCATQ8IVS2 390 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 DSELQ8IZU8 1212 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 MYO1HQ8N1T3 1032 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 MNS1Q8NEH6 495 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 PDLIM5Q96HC4 596 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 VPS39Q96JC1 886 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 ZNF285Q96NJ3 590 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 ACAT2Q9BWD1 397 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 ENAMQ9NRM1 1142 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 INTS7Q9NVH2 962 aaKnown RBP14.77□□□□□ -0.05
VAPA-201ENST00000340541 EURLQ9NYK6 297 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 KCND3Q9UK17 655 aa14.77□□□□□ -0.05
VAPA-201ENST00000340541 OR2A25A4D2G3 310 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 C21orf140B9A014 251 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ZSCAN9O15535 394 aaPredicted RBP14.76□□□□□ -0.05
VAPA-201ENST00000340541 WISP3O95389 354 aaPredicted RBP14.76□□□□□ -0.05
VAPA-201ENST00000340541 CAPN1P07384 714 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 PRKAR1AP10644 381 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ZNF460Q14592 562 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ZXDCQ2QGD7 858 aaPredicted RBP14.76□□□□□ -0.05
VAPA-201ENST00000340541 COLEC12Q5KU26 742 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 MBOAT1Q6ZNC8 495 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 CEP97Q8IW35 865 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 SYTL1Q8IYJ3 562 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 GPR135Q8IZ08 494 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 MR1Q95460 341 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 CLIP3Q96DZ5 547 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ABHD17AQ96GS6 310 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 CHST8Q9H2A9 424 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 SYNPO2LQ9H987 977 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 PARVBQ9HBI1 364 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 STOX2Q9P2F5 926 aaPredicted RBP14.76□□□□□ -0.05
VAPA-201ENST00000340541 TAC3Q9UHF0 121 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 MTO1Q9Y2Z2 717 aaKnown RBP14.76□□□□□ -0.05
VAPA-201ENST00000340541 AP1M2Q9Y6Q5 423 aa14.76□□□□□ -0.05
VAPA-201ENST00000340541 ZNF839A8K0R7 811 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 SAT1P21673 171 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 ECHS1P30084 290 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 CMPK1P30085 196 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 FOXK1P85037 733 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 PRDX1Q06830 199 aaKnown RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 DEFB109BQ30KR1 87 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 PTCHD3Q3KNS1 767 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 KBTBD12Q3ZCT8 623 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 ZC3H12BQ5HYM0 836 aaKnown RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 UBAP2Q5T6F2 1119 aaKnown RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 ATP1A1-AS1Q5TC04 95 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 ICE2Q659A1 982 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 ZNF425Q6IV72 752 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 RHBDD2Q6NTF9 364 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 FAM198BQ6UWH4 519 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 RNF44Q7L0R7 432 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms