RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ALG2Q9H553 416 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 EPHX3Q9H6B9 360 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 GID8Q9NWU2 228 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 LEF1Q9UJU2 399 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SNX6Q9UNH7 406 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 AP4S1Q9Y587 144 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MTCH2Q9Y6C9 303 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3DA0A087WVF3 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3IA0A087WXS9 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3EA0A087X179 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3KA0A087X1G2 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 EME2A4GXA9 379 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3FA6NER0 549 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 POM121BA6NF01 834 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MGAT4DA6NG13 374 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 C2CD4DB7Z1M9 353 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3LB9A6J9 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 ARPC2O15144 300 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3HP0C7X1 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 ACP5P13686 325 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 AMD1P17707 334 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 NTSR1P30989 418 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CDKN2CP42773 168 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MRPL19P49406 292 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 NRF1Q16656 503 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PGS1Q32NB8 556 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MAP7D1Q3KQU3 841 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3GQ6DHY5 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3CQ6IPX1 549 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 METTL2BQ6P1Q9 378 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TMEM92Q6UXU6 159 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SLCO4C1Q6ZQN7 724 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF765Q7L2R6 523 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 LRRC56Q8IYG6 542 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBC1D3Q8IZP1 549 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TCAIMQ8N3R3 496 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 FLCNQ8NFG4 579 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 HUS1BQ8NHY5 278 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TFGQ92734 400 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 N4BP2L2Q92802 583 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 FOPNLQ96NB1 174 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 OR52E6Q96RD3 313 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CGREF1Q99674 301 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TBCDQ9BTW9 1192 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 OSGEPL1Q9H4B0 414 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SGK2Q9HBY8 427 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PFDN4Q9NQP4 134 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MRGBPQ9NV56 204 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 GPRC5BQ9NZH0 403 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 MOSPD1Q9UJG1 213 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 AURKCQ9UQB9 309 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 KCNK6Q9Y257 313 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SNX13Q9Y5W8 968 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TCRBV3S1A0A5B6 114 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SHISA7A6NL88 538 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 QSOX1O00391 747 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 LIN7AO14910 233 aaPredicted RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 TGFB1P01137 390 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 UBTFL6P0CB48 400 aaPredicted RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 CKMT2P17540 419 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 C5AR1P21730 350 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 ACSL1P33121 698 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 CLCNKAP51800 687 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC14A1Q13336 389 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 GTF2H3Q13889 308 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 CCDC85BQ15834 202 aaPredicted RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 GGTA1PQ4G0N0 100 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 TPRG1LQ5T0D9 272 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 NOXRED1Q6NXP6 359 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 PDSS2Q86YH6 399 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 HID1Q8IV36 788 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 CLEC4FQ8N1N0 589 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 TP53I13Q8NBR0 393 aaPredicted RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 OR10Q1Q8NGQ4 319 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 OR9A1PQ8NGU1 263 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 OR10A6Q8NH74 314 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 CSGALNACT1Q8TDX6 532 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC13A3Q8WWT9 602 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 MIEF2Q96C03 454 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 RIPOR3Q96MK2 946 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC29A1Q99808 456 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC29A3Q9BZD2 475 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 KLHL4Q9C0H6 718 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 OR51B5Q9H339 312 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 RPF2Q9H7B2 306 aaKnown RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 SERHLQ9NQF3 203 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 C2orf42Q9NWW7 574 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 PNMA8BQ9ULN7 279 aaPredicted RBP7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 GPR34Q9UPC5 381 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 PCDHB14Q9Y5E9 798 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 PIAS3Q9Y6X2 628 aa7.15□□□□□ -1.26
SRFBP1-201ENST00000339397 OR52A4PA6NMU1 304 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 GPR37O15354 613 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 RNASEH1O60930 286 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 C8BP07358 591 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 HSD17B1P14061 328 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 HOXB2P14652 356 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms