RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZBTB2Q8N680 514 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PNPLA1Q8N8W4 532 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 OR5K1Q8NHB7 308 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 MAGEE2Q8TD90 523 aaPredicted RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 TMBIM1Q969X1 311 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 RHBDF1Q96CC6 855 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 CHFRQ96EP1 664 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 ALG14Q96F25 216 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 FBXL20Q96IG2 436 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 RNF145Q96MT1 663 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 SPON2Q9BUD6 331 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 C1orf50Q9BV19 199 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 SPATA9Q9BWV2 254 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 IPPKQ9H8X2 491 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 POLR1BQ9H9Y6 1135 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 TBC1D23Q9NUY8 699 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 OPTCQ9UBM4 332 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 C3orf18Q9UK00 162 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PPIL1Q9Y3C6 166 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 POLR3HQ9Y535 204 aaPredicted RBP10.5□□□□□ -0.73
RTN3-201ENST00000338850 ASB1Q9Y576 335 aa10.5□□□□□ -0.73
RTN3-201ENST00000338850 PLXNA2O75051 1894 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 DCHS1Q96JQ0 3298 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 IGLV3-16A0A075B6K0 115 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ELOVL7A1L3X0 281 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 OTOL1A6NHN0 477 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 TAPBPO15533 448 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 OR1I1O60431 355 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 TPST1O60507 370 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 UGDHO60701 494 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 SNAP29O95721 258 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 TRBC1P01850 177 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 MPC1LP0DKB6 136 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ITIH1P19827 911 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CRHBPP24387 322 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 HOXA6P31267 233 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CDKN1CP49918 316 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 GZMMP51124 257 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RAD23AP54725 363 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CDH15P55291 814 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RHOAP61586 193 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CTBSQ01459 385 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 PCDH1Q08174 1060 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 PMS2P3Q13401 168 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 NFATC2Q13469 925 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RUNX3Q13761 415 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ACOX1Q15067 660 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 LPAL2Q16609 132 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CDKN3Q16667 212 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 USP39Q53GS9 565 aaKnown RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 PYCR3Q53H96 274 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 TMEM196Q5HYL7 178 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 GTF2IRD2BQ6EKJ0 949 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 PTRHD1Q6GMV3 140 aaKnown RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 LAIR1Q6GTX8 287 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ERICH5Q6P6B1 374 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 Q6ZNB5 142 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 KCTD8Q6ZWB6 473 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 GTF2IRD2Q86UP8 949 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 SERPINA9Q86WD7 417 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 DENND1CQ8IV53 801 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RASGRP3Q8IV61 690 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CPXM2Q8N436 756 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 SETD9Q8NE22 299 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ZNF555Q8NEP9 628 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 STARD8Q92502 1023 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ULK4Q96C45 1275 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 REXO5Q96IC2 774 aaKnown RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 SLC22A12Q96S37 553 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 ACOX2Q99424 681 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 CPPED1Q9BRF8 314 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 C2orf49Q9BVC5 232 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 GPR63Q9BZJ6 419 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 DPY30Q9C005 99 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 NACA2Q9H009 215 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 RMND5AQ9H871 391 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 LRTM1Q9HBL6 345 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 PARD6AQ9NPB6 346 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 DCAF13Q9NV06 445 aaKnown RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 C1orf109Q9NX04 203 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 KCTD5Q9NXV2 234 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 GMEB2Q9UKD1 530 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 FAF1Q9UNN5 650 aaPredicted RBP10.49□□□□□ -0.73
RTN3-201ENST00000338850 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 PCDHGC4Q9Y5F7 938 aa10.49□□□□□ -0.73
RTN3-201ENST00000338850 G3V2T6 193 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 CBX4O00257 560 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 MANBAO00462 879 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 HRO43593 1189 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 ULK1O75385 1050 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 PGRP06401 933 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 C8GP07360 202 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 NCK1P16333 377 aa10.48□□□□□ -0.73
RTN3-201ENST00000338850 EPB42P16452 691 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms